Fusarium oxysporum: FOXG_01972
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Entry
FOXG_01972 CDS
T04882
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
fox
Fusarium oxysporum
Pathway
fox03013
Nucleocytoplasmic transport
fox03015
mRNA surveillance pathway
fox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOXG_01972
09122 Translation
03013 Nucleocytoplasmic transport
FOXG_01972
03015 mRNA surveillance pathway
FOXG_01972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fox03019
]
FOXG_01972
03041 Spliceosome [BR:
fox03041
]
FOXG_01972
Messenger RNA biogenesis [BR:
fox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
FOXG_01972
TREX complex
FOXG_01972
Spliceosome [BR:
fox03041
]
Complex C
Other components
EJC/TREX
FOXG_01972
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
FOXG_01972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
28944198
NCBI-ProteinID:
XP_018235159
UniProt:
A0A0J9UCM2
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All DBs
Position
5:2767687..2770797
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AA seq
325 aa
AA seq
DB search
MRSSLILAPIDLATTVAKVADVNPVMTTLAMVLESPFATIHETLIANGSMTDSKRTVILE
NPSCPGRPFDTCPDNRRAPAPRRRRESPDQESKGAKLRVDNIHYDLTEEDLDELFRRIGP
VVRLQLRYDRAGRSEGTAYVTYELKEDAQEAVKQFDGANANGQPIRLTLLPSRNPFDTAV
MPGRPLAERISSPGERRSHSPHRRYDDDDAARRGIDRYVPGQGPRRSPMPRQGGRGRGQG
GRRPGARRDGRDGGRDQEGGRGGRGNPRGKKTQEELDAEMADYFGGGDNAQAAEPADQQD
APPAQTQAPAQTQAQAATDDIDMIE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagatcatcgctgatactcgcgccaatcgacctcgcaaccaccgtggccaaggtcgcc
gacgtgaaccccgtaatgactaccctcgcgatggtgttagaaagtccgttcgcgacgatt
cacgaaaccttgatagcgaatgggtccatgaccgattcgaagagaacagtaatacttgaa
aacccttcctgcccaggacgcccttttgacacttgtccagacaaccgccgagctcctgct
cctcgccgccgccgcgaatccccagaccaggagtccaagggcgccaagctcagagttgac
aacattcactatgatctcactgaagaagacctggatgagctatttcgaagaattggccca
gttgttcgccttcagctacggtatgaccgcgctgggcgatccgagggtactgcttacgtg
acgtacgagctgaaggaggacgctcaggaggcggtcaagcagtttgatggtgccaatgcc
aatggtcaacccattcgattgactctgctaccctcgcgaaacccatttgataccgccgtt
atgcccggccgtccactggcagagcgaatctcgagtccgggggaacgaagatcccattct
ccccatcgccggtatgatgacgacgatgctgcccgcagaggaatcgatagatatgttccc
ggtcagggtcctcgtcgcagcccaatgcctagacagggtggtcggggccgaggacagggt
ggtcgtcgccctggagctcgacgcgatggcagagatgggggcagagatcaggagggcgga
cgcggcggacgaggcaaccctcgtggaaagaagacacaggaggagctggatgcagagatg
gcggattactttggcggcggtgacaacgcgcaggccgccgaacctgctgaccagcaagat
gcaccccctgctcaaacacaggcaccggcgcagactcaagctcaagctgcgaccgacgat
attgacatgatcgagtag
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