Fusarium oxysporum: FOXG_02006
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Entry
FOXG_02006 CDS
T04882
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
fox
Fusarium oxysporum
Pathway
fox03020
RNA polymerase
fox03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FOXG_02006
09124 Replication and repair
03420 Nucleotide excision repair
FOXG_02006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fox03021
]
FOXG_02006
03400 DNA repair and recombination proteins [BR:
fox03400
]
FOXG_02006
Transcription machinery [BR:
fox03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
FOXG_02006
DNA repair and recombination proteins [BR:
fox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
FOXG_02006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
DUF6699
Motif
Other DBs
NCBI-GeneID:
28944230
NCBI-ProteinID:
XP_018235235
UniProt:
A0A0J9UDQ5
LinkDB
All DBs
Position
5:complement(2872054..2873775)
Genome browser
AA seq
127 aa
AA seq
DB search
MNAPDRFELFLLGEGEKKIEEKVFSGMSNTSDFVLMKEDHTLGNLLSEHLKMHPNVYMAG
YKIAHPNVPELFIRVQTDGTITPRDVFTSVCEKLIKQLEMLHQEFTREWELRRITNTGEQ
GNMQNGH
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcctgatcgtttcgagctgttcctgctcggagagggcgagaagaagatcgag
gaaaaggtcttctcaggaatgtccaatacctccgattttgtcctcatgaaagaagaccac
actcttggtaaccttctctccgagcacctgaagatgcaccccaatgtctacatggctggg
tataagatcgctcaccccaatgttcctgagcttttcatacgagtccagacagacggaacc
atcacccctcgcgatgtctttacttctgtctgtgagaagctcattaagcaactcgagatg
ttgcatcaggagttcacgcgagagtgggaattgagacgcattaccaacactggtgagcag
ggaaacatgcagaacggtcactga
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