Fusarium oxysporum: FOXG_02019
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Entry
FOXG_02019 CDS
T04882
Name
(RefSeq) ATP-dependent RNA helicase DED1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
fox
Fusarium oxysporum
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fox03019
]
FOXG_02019
03041 Spliceosome [BR:
fox03041
]
FOXG_02019
03036 Chromosome and associated proteins [BR:
fox03036
]
FOXG_02019
Enzymes [BR:
fox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FOXG_02019
Messenger RNA biogenesis [BR:
fox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
FOXG_02019
mRNA cycle factors
Common to processing body (P body) and stress granule
FOXG_02019
Spliceosome [BR:
fox03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
FOXG_02019
Chromosome and associated proteins [BR:
fox03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
FOXG_02019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Utp25_C
Motif
Other DBs
NCBI-GeneID:
28944243
NCBI-ProteinID:
XP_018235259
UniProt:
A0A0J9UD01
LinkDB
All DBs
Position
5:complement(2931237..2934879)
Genome browser
AA seq
670 aa
AA seq
DB search
MADQINMGGLSLNDGAQQGPPQGQRSYIPPHMRRQGGAPQGGPPAMNGGPPPAGPGPNGL
GNSAWANQNYGARQSNWGNDVPTYQNNNNNRRGGWGGRGGYSGGGGNLDGHSGGGGGYAA
RGSGDGQWRDGKHVPGPANPRVERELFGTPDDPSKQHTGINFEKYDDIPVEASGHEVPEP
VHQFTTPPLDEHLCRNIELAHYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPI
LSQAFINGPSPVPANAAGQFGRQRKAYPTSLILAPTRELVSQIFDESRKFAYRSWVRPCV
VYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMGFEP
QIRRIVEGEDMPQVQDRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKV
EYVEDVDKRSVLLDILHSNANGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRER
ERALEFFRNGRCPILVATAVAARGLDIPNVLHVINYDLPTDVDDYVHRIGRTGRAGNTGI
ATAFFNRGNRGIVRELMDLLKEANQEVPAFLETIARESSFGGRGGRSRGGGGRGGATRDF
RKFGGGGGGGFGGNNGGGGGFNAPSQGSGYGGGGFGGSGGYGGGGYSGGGGYGGGGYGNP
SGPGAQSSWW
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcaaatcaacatgggtggtctctccctcaacgatggcgcccagcagggccct
cctcagggtcaacgatcctacatcccccctcacatgcgccgccagggcggcgctccccag
ggtggtcctcctgctatgaacggtggtcctcctcctgctggacctggtcccaatggtctt
ggcaacagtgcatgggctaaccaaaactatggtgcccgtcaatccaactggggcaacgac
gttcccacctatcagaacaacaacaacaaccgccggggcggctggggcggtcgaggtggt
tacagcggtggtggcggcaacttggatggtcactctggaggcggtggtggttacgctgcc
cgcggctctggtgatggccagtggcgcgatggaaagcacgttcctggcccggctaacccc
cgtgtcgagcgcgagctttttggtacccccgatgacccctccaagcagcacaccggtatc
aacttcgagaagtacgatgacattcccgttgaggcttctggtcatgaggttcctgagcct
gtccaccagttcaccactcctcctctggatgagcatctctgccgcaatatcgagcttgct
cactacaaggttcccactcctgtccagaagtactcgatccccatcgttatgggtggtcgt
gatctgatggcctgtgctcagactggttccggaaagacgggtggtttcttgttccccatc
ctctctcaggccttcatcaacggcccttctcccgtgcccgctaatgccgctggccagttc
ggccgtcagcgcaaggcttaccccacctctttgattcttgcccctacccgcgaacttgtc
tcccagatttttgatgaatcccgaaagttcgcctaccgatcttgggtccgaccttgtgtt
gtctacggcggtgccgatattggttcccagctccgacagattgagcgtggctgcgatttg
cttgttgctactcctggtcgattggtcgatctcatagagcgaggtcgcatctccctgcag
aacatcaagtatctggtccttgatgaggccgatcgcatgcttgacatgggtttcgagccc
cagattcgccgcattgtggagggtgaggacatgcctcaagttcaggaccgtcaaactctc
atgttctcggctaccttcccccgcgatattcagatgcttgcccgcgatttccttaaggac
tatattttcctttctgtcggtcgtgttggttctacttcagagaacatcacccagaaggtt
gagtatgtcgaggatgtcgacaagcgctccgttcttctggatatccttcactccaacgcc
aatggtttgaccctgattttcgtcgagaccaagcgtatggccgattccctttcggatttc
cttatcaaccagaacttcccagctacttccattcacggtgatcgtacccagcgtgagcgt
gagcgcgctcttgagtttttccgcaacggtcgatgcccgattttggtcgctaccgctgtc
gcagctcgtgggttggacattccgaatgttttgcatgttatcaactacgatcttcctact
gatgttgatgactacgttcaccgaattggtcgaaccggtcgtgccggaaacaccggtatt
gcgaccgctttcttcaaccgaggcaaccgtggaattgttcgggagcttatggatctcctg
aaggaagctaaccaagaggttcctgctttcctcgagaccattgctcgtgagtcttccttc
ggtggtcgtggtggtcgttctcgtggtggtggtggccgtggtggtgcaacacgtgacttc
cgtaagttcggcggcggtggtggtggcggctttggcggcaacaacggcggcggcggcggc
ttcaacgctccttctcagggctcaggctatggtggaggcggtttcggtggctccggcggc
tacggaggtggtggctacagcggcggcggtggctacggaggtggtggttatggaaacccc
agtggccctggagctcagtcttcttggtggtaa
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