Fusarium oxysporum: FOXG_02171
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Entry
FOXG_02171 CDS
T04882
Name
(RefSeq) pre-mRNA-splicing factor RSE1
KO
K12830
splicing factor 3B subunit 3
Organism
fox
Fusarium oxysporum
Pathway
fox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOXG_02171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fox03021
]
FOXG_02171
03041 Spliceosome [BR:
fox03041
]
FOXG_02171
03036 Chromosome and associated proteins [BR:
fox03036
]
FOXG_02171
Transcription machinery [BR:
fox03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
FOXG_02171
Spliceosome [BR:
fox03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
FOXG_02171
Complex B
FOXG_02171
Complex C
U2 SnRNP specific factors
FOXG_02171
Chromosome and associated proteins [BR:
fox03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
FOXG_02171
TFTC complex
FOXG_02171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
28944389
NCBI-ProteinID:
XP_018235545
UniProt:
A0A0J9UEG0
LinkDB
All DBs
Position
5:complement(3409725..3414542)
Genome browser
AA seq
1212 aa
AA seq
DB search
MATTSNMFLYSLTVQPPTNVTQAVLGQFAGTREQLIITAAGSQLSLLRPDPSQGKVITLL
SHDVFGIIRSLAAFRLAGSNKDYLIIASDSGRITIIEYLPAQNRFHRLHLETFGKSGVRR
VIPGEYLACDPKGRACLIASTEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVISMVALD
VGYSNPVFAALEIDYSEIDQDSTGQAMEELDTQLVYYELDLGLNHVVRKWSDPVDPTASI
LFQVPGGNDGPSGVLVCGEENITYRHSNQEAFRVAIPRRRGATEDPNRKRTIVSGIMHKL
KGSAGAFFFLLQTDDGDLFKLSIDMIEDEEGNPTGEVKRLKIKYFDTVPVASSLCILKSG
FLYVASQFGNYSFYQFEKLGDDDEELEFYSDDFPADPRASYEPVYFHPRPTENLALVESI
PAMNPLLDCKVANLTGEDAPQIYTICGNGPRSSFRMLKHGLEVNEIVASELPGIPSAVWT
LKLNRSEQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGDDGLIQVHP
KGIRHVRNGHVNEWAAPQHRSIVAATANAHQVAVALSSGEIVYFEMDADGSLAEYDEKKE
MFGTVTCLSLGDVPEGRLRSSFLAVGCDDCTVRILSLDPESTLENKSVQALTAAPTSLAI
IAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKEVRLFQVTVQGKT
CVLGLSSRPWLGYADPITKGFVVTPLNYVDLEWGWNFSSEQCEEGIVGIQGQSLRIFNID
RLGDTLIQKSIPLTYTPKKLVKHPDQPLFYTIEADNNTLPPELRAQLLADPKIVNGDSRV
LPPEDFGYPKGTRRWASCINVIDPLSEEGQVVQTIDLENNEAAVSAAIVSFSSQDNESFL
VVGTGKDMVVNPRSYSEGYLHIYRFQDGGRELEFIHKTKIEEPPLALLAFQGRVAVAVGT
QLRIYDLGMRQMLRKSQAEVAAQQIVSLNTQGSRIIVGDVQQGVTYVVYKPASNKLIPFV
DDTIARWTTCTTMVDYESVAGGDKFGNMFIVRCPEKASEEADEEQTGLHLINAREYLHGT
PHRVSLMCHFYTQDIPTSITKTSLVVGGQEILLWSGIMGTIGVFIPFISREDADFFQNLE
QHLRTEDPPLAGRDHLMYRGYYAPVKGVIDGDLCERYNLLPNDKKLMIAGELDRSVREIE
RKISDIRTRSAF
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacgtcgaacatgttcttgtactcgctgacggttcagccgccgacaaacgtc
acgcaagcggtcctgggccagttcgcaggcactagagaacagcttatcatcactgctgct
ggctcgcagctctccctactacgacccgatccatcccagggaaaggtgattaccctccta
tcacatgatgtctttggcatcatccgttccctcgccgcttttcggttagctggtagcaat
aaggactacttgatcattgcgtccgactctggtcgtatcacaatcattgagtacctccct
gcacagaaccgctttcaccgtttacatctcgaaacttttggcaaatccggtgtacggaga
gtcattcctggcgagtatctagcctgcgaccctaagggcagagcatgcttaattgcctca
actgagaagaacaaacttgtctacgttctcaaccgtaactcacaagctgagctcacaatc
tcgtcaccgcttgaggcccacaaacctggcgtcctggtcatctccatggttgcgcttgat
gtcggctactcgaatccagtgtttgccgctctcgagattgactactccgagattgaccaa
gactcgaccggccaagcaatggaagagttggacactcaattggtttattacgagcttgat
ttgggactcaatcacgttgtgcgcaagtggtcagaccctgttgacccaacagcctcaatt
ctgttccaggtccctggtggaaatgatgggcctagtggtgtgctcgtgtgcggtgaggaa
aatatcacatatcgacactcaaatcaggaagcgttccgtgttgccatccctcgtcgacgc
ggcgccactgaagatccaaaccgcaagcgcacgatcgtgtctggtatcatgcacaagctg
aaaggcagtgcaggcgcgtttttcttcctcctgcaaacagacgacggtgatctcttcaaa
ctctcgatcgatatgattgaggatgaggaaggcaaccccactggagaagtcaaaagactc
aagatcaagtattttgacaccgttccggtcgcctcaagtctctgcattttgaagagcggt
ttcctctacgttgcttctcagtttggtaactactcattctaccaatttgaaaagctcggt
gatgacgatgaggaactagagttctacagtgatgacttccccgcggatcccagggcttct
tacgaaccggtttacttccaccctcggccaactgaaaacttggccctggtcgagagcatc
cctgccatgaatcccctcctagattgcaaggtcgcaaacctcactggagaagatgcacct
caaatctataccatttgtggtaacggcccccgaagtagcttcaggatgctcaagcatggt
ttggaagtcaacgagattgttgcctctgaactgcctggaattccttctgctgtttggacg
ctgaagctgaatcgctcagaacagtatgatgcttacattgtactatcatttaccaacggt
acgctagtcctcagtattggcgagactgttgaggaagtcagtgactccggttttctcaca
agtgttccaacgctggcggcccagctccttggtgatgatggactgatccaggttcatccc
aagggcattcgacatgtgcgtaatggtcatgtcaatgaatgggccgccccgcaacatcgc
tccattgttgctgctacagccaatgctcatcaggtcgctgtcgctctcagctctggtgag
attgtctacttcgagatggatgcggacggctcactggctgagtatgatgaaaagaaggag
atgtttggtaccgttacttgcctaagcctgggtgacgtccccgagggacgattaagaagt
tcattcttggccgtcggttgtgacgattgcactgtccgcattctaagcctggatccagag
tcgactttggaaaacaagtcagttcaggctcttacggctgctccaacatcgctggcaatc
atcgcaatggatgactcctcgtcgggcggttctaccctctatctccacatcggtttacac
tccggtgtctatctcaggacagttcttgacgaagtcactggtgagttgacagacacgcgc
caaaagttcctcggtcccaaggaagtccgacttttccaggtcacagttcaaggcaagaca
tgcgtgcttggtctaagctccaggccttggcttggttacgcagacccgatcacaaaaggt
tttgtagtgacgcccctaaactacgtcgaccttgagtggggttggaacttcagtagtgag
cagtgcgaagaaggcattgttggtatccagggtcaatcattacgaatttttaatatcgat
cggcttggcgatacactcatccagaaatcaattcctttgacttataccccgaagaaactt
gtaaagcaccctgatcagcctctcttctacactatcgaggcagacaacaacactttacca
cctgagttacgtgcacaacttttggcagaccccaaaatcgtcaacggtgattctagagtg
ctcccacctgaagattttggctatcccaaaggtacacgtcgatgggcatcttgcattaat
gtgatagatccactgtccgaggaaggacaagttgtgcaaacgattgatctggagaacaat
gaagcggccgtcagtgcagccatcgtgtctttttcaagccaagataacgagagctttttg
gtagttggtaccggcaaggacatggtggtcaatcctcgcagctacagcgaaggatatcta
cacatttaccgatttcaagatggggggcgagaacttgagttcattcacaaaaccaagatt
gaagaaccacctctagctcttttggcttttcaaggaagagtagctgttgcagttggaaca
cagttgcgtatatatgatcttggcatgagacagatgctccgcaaatctcaggctgaagta
gcagcgcagcagatcgtgtccctgaacacccagggcagtcgaattattgttggtgatgtt
caacagggcgtaacctacgtggtatacaagcctgcgtcgaacaaactcattcccttcgtc
gatgataccatcgcaaggtggaccacatgcacaaccatggtagattacgagtcggtggcc
ggcggtgacaagttcggaaatatgttcattgtccgctgccctgaaaaggccagtgaagag
gctgacgaggagcaaacgggcttgcatcttattaatgcgcgagaatatcttcacggtaca
cctcacagagtaagtctgatgtgccatttctacacacaggacataccaaccagtatcacc
aaaacgagtctggtagttggtggacaggaaattttgctatggagtggtatcatgggcact
atcggagttttcataccatttatcagtcgtgaagatgcggacttcttccagaatctcgaa
caacacctaaggaccgaggaccccccgctcgccggacgagatcatctcatgtatcgcggt
tattatgctcctgtcaagggagtcattgatggcgatctatgcgagcgatacaacctcttg
cccaacgacaagaagcttatgattgccggcgaattggaccgatcggtccgagagatcgag
cggaagatttctgatattcgtacacggtctgcattctga
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integrated database retrieval system
