KEGG   Fusarium oxysporum: FOXG_02429
Entry
FOXG_02429        CDS       T04882                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
fox  Fusarium oxysporum
Pathway
fox03020  RNA polymerase
fox03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fox00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    FOXG_02429
  09124 Replication and repair
   03420 Nucleotide excision repair
    FOXG_02429
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fox03021]
    FOXG_02429
   03400 DNA repair and recombination proteins [BR:fox03400]
    FOXG_02429
Transcription machinery [BR:fox03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     FOXG_02429
DNA repair and recombination proteins [BR:fox03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      FOXG_02429
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Cas12f1-like_TNB Zn_ribbon_Nudix DUF7577 UPF0547
Other DBs
NCBI-GeneID: 28944626
NCBI-ProteinID: XP_018236005
UniProt: A0A0J9UFP2
LinkDB
Position
5:4241099..4243180
AA seq 131 aa
MATPQSTTSYEGAEGDKKLEQITFRFCSECSNMLYPKEDEDAHKLQFTCRTCQYTEDAKS
TCVFRNVLNTSAGETAGVTQDVGSDPTLPRSTKTCPSCQHTEAVFFQSQQRSAETGMKLF
YVCCECGHIFT
NT seq 396 nt   +upstreamnt  +downstreamnt
atggctaccccccaatccaccacctcttacgagggcgccgaaggcgacaagaagctcgag
cagatcaccttccgattctgttccgaatgctccaacatgctttatcccaaggaggacgag
gatgctcacaagcttcagtttacctgccgaacttgccagtacaccgaggacgccaagtct
acctgtgtcttccgcaacgtcctcaacacctcggccggtgagaccgccggtgtcacccag
gatgttggctccgatccaacgctcccgcgatctacaaagacctgccctagttgccagcac
accgaagctgtgtttttccagtctcagcagcgaagcgctgaaaccggcatgaaactcttc
tacgtctgctgcgagtgtggtcacattttcacttaa

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