Fusarium oxysporum: FOXG_03392
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Entry
FOXG_03392 CDS
T04882
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
fox
Fusarium oxysporum
Pathway
fox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOXG_03392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fox03019
]
FOXG_03392
Messenger RNA biogenesis [BR:
fox03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
FOXG_03392
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PBSX_XtrA
Motif
Other DBs
NCBI-GeneID:
28945519
NCBI-ProteinID:
XP_018237510
UniProt:
A0A0J9UJT7
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Position
8:complement(2333504..2334905)
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AA seq
333 aa
AA seq
DB search
MASNKGLTRTTFAKLSPHPYLLASLDPASDDIRPARSNGRARNESRKPTVNLASLSHAHG
SAVVRVGDTTVICGVRGETILTPNIPNYRASNTETELKDYDLLVPNIELATGCAPQFLPG
GPPSTLAQTLSTRIYSLLHSSRIIKPDDLRIWHTPPSEDLEDRMEEDEEDTSNENRSVVA
YWVLYIDIFFISFDGNPFDAAWAATMAAVRNTKLPGARYDIDREMIICSHKQPRPLNITK
IPIACTAVVFTGKETDRPTDGRFWLLVDPDRLEESLCDESVTVVVDCKDGDVKILSISKH
GGTALTTQFLTSEQFLGWASKRWEEFNAAITQS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaataaaggactcacgcggacgactttcgccaagctgtcgcctcatccgtat
ctgcttgccagccttgatcccgcctctgatgatatccgcccagctcgaagcaatggccga
gcccgaaacgaatctcgcaagccaacagtcaacttagcgagcttgtcacacgctcatggg
agtgctgttgttcgcgtcggcgacactaccgtcatttgtggtgtccgaggcgagactatc
ttaacacccaacatcccgaattatcgtgcctccaataccgagaccgagttgaaagactac
gacctcctggtgcccaacattgagcttgctacaggttgcgctcctcagttcctcccaggt
ggtccaccaagcactcttgcccagactctcagcacacggatatactcccttcttcacagc
tccagaatcatcaagcctgatgacctgcgaatatggcacacaccaccatctgaagacctt
gaagatcgcatggaagaggatgaagaggacacaagcaacgagaacagatccgttgtggct
tactgggtgctctacattgatatatttttcatttcgttcgatggaaacccgttcgatgcc
gcgtgggctgctacaatggctgcggtacgaaacacgaagcttcccggagcgcgatacgac
attgaccgagagatgattatctgctcccacaaacagccccgacctctcaacatcacgaaa
attccaatcgcatgcacagcagttgtctttaccggcaaagaaactgaccgacccactgac
ggcaggttctggctactcgttgacccagacagacttgaagagtcactttgcgatgagagt
gtaacggtcgtggtggattgcaaggacggagacgtcaagatcttatccatctccaagcat
ggaggaactgccctgacgacccagttcctcacatcagagcaattcctgggctgggcctca
aagcgatgggaggagttcaacgcggccatcacccaatcatag
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