Fusarium oxysporum: FOXG_03592
Help
Entry
FOXG_03592 CDS
T04882
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
fox
Fusarium oxysporum
Pathway
fox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOXG_03592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fox03041
]
FOXG_03592
03009 Ribosome biogenesis [BR:
fox03009
]
FOXG_03592
Enzymes [BR:
fox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FOXG_03592
Spliceosome [BR:
fox03041
]
Complex A
U2 snRNP components
U2 related factors
FOXG_03592
Complex B
FOXG_03592
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
FOXG_03592
Ribosome biogenesis [BR:
fox03009
]
Eukaryotic type
90S particles
Helicases
FOXG_03592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
AAA_22
T2SSE
SRP54
nSTAND3
HA2_N
AAA_19
ATPase
SLFN-g3_helicase
AAA_23
Motif
Other DBs
NCBI-GeneID:
28945708
NCBI-ProteinID:
XP_018237841
UniProt:
A0A0J9UNT3
LinkDB
All DBs
Position
8:2951563..2953911
Genome browser
AA seq
712 aa
AA seq
DB search
MDRTSFRDTTAEDAFRLEDGAAHPLRENDLHGRRYFELLSIRRRLPASAKRQEFLDLYHQ
HQVIVVSGETGSGKTTQIPQFILFDELGSSKPIVCTQPHRPSAISDAEQVASELDVRVGE
EVGYQVRFDKRISRVKTRLNYMTDGMLVQLVQGNGSFGKYSCVIIDEAHERTIPTDLLLA
LLKRALPLFPDLKVVIMSATPNVDIFLNYFGQGSHLPLSGREHPVEIRYLQEATPDYASL
ALHTAQHIHQTTGDGDILVFMPSTTEIEDACGQLRSATWGLEVLPLYSHLPKAEQERVFR
RSSRRRCIISTNIAEANVTVDGVVYIVDTGLVIESRYNPRAGLKTIFTGPISRTAAEQRA
SRAGRTKPGVCYRLYTKEDYDEILLPTTPASIHTSDLSRLVLQIKAMGFDDVANFDFIDK
PDPEVFLRALEDLLAMGYLDDTGTITPKGQMASKLPVHPVWFNALEKAHELGCGGDMITI
AAIQNTRHPIFVRGQGPCSTAGPAQRFSCFTSDHITQLNVVDAYMKKEDEAEDLRHEGVY
IDVPGWCSDNSLSMRALEEFKRIRMKLRKSFADLFKDRPKRFGLESSECDDNLRQALAWA
FSHRVAFSDVGSGNDRYRVLHHNWQAGLSPESNLVGINHRWVIYDSFIMTNCQFLETVTA
IEPEWLRGCENFQEESWALKRGGKTGPYKMPLAKASFEEACGPGTNKQTDWW
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcacttcgtttcgcgatacaactgcagaggatgccttccgtcttgaagacggc
gcagctcatccacttcgcgaaaatgatcttcatggcagaagatatttcgagttactcagt
attcgccgaaggcttccagcctcagcaaagcgccaagagtttctcgacctttaccatcaa
caccaggtgattgtcgtgtctggcgaaacgggctcaggcaaaaccacgcaaataccacag
ttcatcctgttcgacgagcttggttcatcgaaacctatcgtttgtacacagccccatcga
ccatctgctatttcagatgcagagcaggtcgcctctgagctagatgtcagagtgggtgaa
gaagtgggatatcaggttcgcttcgacaagcgtatttctcgagtcaaaacgcgcttaaac
tacatgaccgacggaatgcttgtgcagttggttcagggcaatggttctttcggcaaatac
agttgtgtcatcattgatgaggcccacgagcgcaccatcccgacggatctacttctagca
ctattgaagcgtgccttaccactctttcctgatctgaaagtagtcatcatgtcagccacc
cctaacgtggatattttcctgaactacttcggtcaaggcagtcatctccctctatccggc
cgagaacatcctgtcgagatccgttatctccaagaagcaacccctgattacgctagtcta
gctcttcatactgctcaacacatccaccagactactggagatggtgatattcttgtcttt
atgccgtctactactgagatcgaagatgcttgtgggcaattgcgatcagcaacctggggc
cttgaagtgttgcccctttattctcatttgcccaaagctgagcaggaaagggtctttaga
cgatcgtctcgacgtcggtgcattatctctaccaatattgcggaggccaatgtgaccgtt
gatggtgttgtctacatcgttgataccgggctggtaattgaatcccgctacaacccccgc
gccggccttaagacaatttttaccgggcctatctctaggacagcagcagagcagcgagcc
agtcgcgctggtcgaactaaaccaggcgtatgctatcgcctttacacgaaggaggattac
gatgaaattcttcttcctacaacgcccgcttccattcacacaagcgacctttctcgcttg
gtcctacagattaaggctatgggattcgatgatgtggctaactttgattttatcgacaaa
cctgatcctgaggttttcttacgcgctctcgaagatcttcttgctatgggttatcttgac
gatactgggactatcactccgaagggccagatggcttcaaaacttccggtccacccggta
tggttcaacgctcttgaaaaggcccatgaacttggctgcggtggtgacatgataactatc
gccgccattcaaaacacacggcatccgatctttgtccgtggtcagggcccctgttccact
gcaggtccggcacagcgattttcctgtttcacttctgatcacatcacgcagctcaacgta
gtggatgcatatatgaagaaggaagatgaggccgaggatcttagacatgagggggtttac
atcgacgtaccggggtggtgctcggacaactcgcttagtatgcgcgctctcgaagagttc
aagcgtattcgcatgaagctgaggaagtcatttgccgatttattcaaggataggcccaag
cgattcgggctcgagtcctctgaatgtgatgacaatctccgccaagcgcttgcttgggcc
ttcagtcatcgcgtggctttcagcgacgttggcagtgggaatgaccgctacagagttctt
catcacaactggcaagctggtttatctcctgaaagcaaccttgtaggaatcaatcacaga
tgggtgatttatgactccttcatcatgaccaactgtcagttcttggagacagtcacggcc
atcgagcccgagtggctcaggggatgtgagaactttcaggaggaaagctgggcgttgaaa
cgtgggggcaagactggcccttacaaaatgccacttgcaaaggcatcgtttgaagaggct
tgcgggccaggcaccaacaaacaaacggattggtggtga
DBGET
integrated database retrieval system
