Fusarium oxysporum: FOXG_04342
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Entry
FOXG_04342 CDS
T04882
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
fox
Fusarium oxysporum
Pathway
fox03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FOXG_04342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fox03021
]
FOXG_04342
03036 Chromosome and associated proteins [BR:
fox03036
]
FOXG_04342
Transcription machinery [BR:
fox03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
FOXG_04342
Coactivators
SAGA/TFTC/STAGA complex
FOXG_04342
Chromosome and associated proteins [BR:
fox03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
FOXG_04342
STAGA complex
FOXG_04342
TFTC complex
FOXG_04342
SAGA complex
FOXG_04342
SLIK complex
FOXG_04342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_NTD2
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WDR55
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
LisH
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EIPR1
eIF2A
Beta-prop_Vps41
ARMC9_LisH
Motif
Other DBs
NCBI-GeneID:
28946397
NCBI-ProteinID:
XP_018239029
UniProt:
A0A0J9UNB3
LinkDB
All DBs
Position
4:4215286..4218749
Genome browser
AA seq
758 aa
AA seq
DB search
MSGPAQTPGAPQAPGYQGPAPTPPAPTHTTTTAATGQSGSSGGPMSNQNLNQIVTDYLLK
RGFNRTEEVFRQESKHLGPDGKPIYQLANLGPKKYQRAFGLLREWVENNLDIYKFELSKL
LWPVFVYSFLELVQHAYTEDAKAFLRDIGPNFQPVHADDLKTLGTITLPQHINENPMTKL
YRENKYRIPLNQHASGDLFNFLERESDQGGSVIRQVLATYCQIDSTARGPITPFSFEAVY
RRSRNMEIESVDTNEGIPGVNIGLSNKDVLDPTAPLKLGPLPMDADLRDDVRAELEEEER
RIPPPPGKTSLVEEFDQKIKREESADAPSRAELPLPPSRPRDIMLEMQKLRENRDRFKID
GATGGVGVPISACMFTFHNTLGSVACMDFSNDGQLVAAGTTESYIRVWSLDGKALPTMNA
HEKEAKFNSRKLIGHSGPVYDVSFSDAVSGPPQKLFGDEGKSNPAMDTRPKLLLSASADG
QIRLWSLESWSCLCLYKSHDGPAFRTLWGPHGHYFISGGYDKAVRLWMQDHASPQRLLVG
HDTAISALAWHPNGLYVFSASDETDKSIRMWSVVTGSCVRVFTGHNEYITAMECAPNGKI
LASADCAGNIFFWDLEKGTRIKRSRGHGKGGIWSLSFSVESNVLASGGQDGTVRLWDVEL
PSDPQKASQQQTGLDATATGADGTSAGGTVGEASRVTAGTSGPAGTSGTTGTHKKKNKEV
MITPDQISAFPTKKTPVMKVKFTRMNLVIVGGCYDPER
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggccagcacaaacaccaggtgcccctcaagcgccgggctatcaagggcctgca
ccaacacctccagctccaacacacacaacaacaaccgcagcgacgggccaaagtggctca
tccggaggcccaatgtcgaatcagaacctcaaccagatcgttacggactacttgctcaag
agggggttcaaccggaccgaagaggtgtttcgtcaggaatctaaacatcttggccccgat
ggcaagcctatctatcaactggccaacctcggcccaaaaaagtaccaacgagcctttggg
cttctacgtgaatgggtcgagaacaatttggacatatacaagttcgaactgtccaagctg
ctgtggcccgtcttcgtctattctttcctggaacttgtccaacatgcctacactgaagat
gcgaaagctttcctcagagacatcggtcctaacttccagccagtacacgcggatgatctc
aagacccttggtaccattacactcccgcagcacatcaacgagaaccccatgacaaagctg
taccgggaaaacaagtaccgaatccctctgaaccaacatgccagcggcgatcttttcaac
tttctggaacgcgaatctgatcagggtggttccgtgattcgacaagtcctggcaacttat
tgccagattgactctacagctcgtggacctattacccccttcagtttcgaagctgtttac
agaaggtcaaggaacatggagatagagagcgtggataccaatgaaggtatcccgggcgtc
aatattggtttgtctaacaaggacgttctcgacccaaccgctcccctgaagcttggaccc
ctacctatggatgccgacctgcgtgacgatgtgcgagctgagcttgaggaagaggagcga
cgaattccgccacctcccgggaaaacatcgctagtggaggaattcgaccaaaaaatcaag
cgtgaggagagcgcagatgccccaagcagagcagagttacccttaccaccctcgagaccg
agggacattatgctagaaatgcaaaaacttcgagagaatcgcgaccgattcaagatcgat
ggtgcgacgggaggcgtgggagtccctatcagcgcatgcatgtttacattccataacacg
cttggaagtgttgcctgtatggacttctccaacgatggacaattagtggcagctggtacc
acggaatcttacatccgggtttggtcgctggatggtaaagccttacccacgatgaacgcg
cacgagaaagaagcgaagttcaacagccgcaaattgatcggacattctgggcctgtttac
gacgtgtccttctccgatgctgtttctggccctccgcagaagctctttggcgacgaagga
aagtcgaaccctgctatggacacgcgaccgaagctgctactatccgcatctgcagatggc
cagatccgtctgtggtcactagagtcttggagttgcctgtgtctatacaagtcccacgat
ggacctgctttcaggacactctggggtccccatggacactatttcatcagtggaggatat
gacaaagctgttcgactgtggatgcaagatcatgcttcccctcaacgattgttggttggg
catgacacggccatctcagcgcttgcatggcaccctaacggtctctatgtcttctccgcc
tctgatgagactgacaagtcgatccgtatgtggtctgtcgtaactggcagctgtgtccgc
gtgtttacaggccacaacgaatacatcaccgccatggaatgcgcgccaaatggcaagatc
ctagcaagtgccgattgtgcaggtaacatcttcttttgggaccttgagaaaggaacacgc
atcaagcggtcacgtggccacggtaagggcggaatttggtcactcagcttcagcgttgaa
tccaacgtgcttgcttctggtggtcaagatggcacagtccgactctgggatgtcgagctg
ccttctgatccccaaaaggcgagccagcaacagacaggcctcgatgcaacagcaacaggg
gccgatggcacaagcgcaggaggcactgttggtgaagcttctcgagtgacagccggaacg
tcaggaccagcgggtaccagcggcaccactggaactcataagaaaaagaataaggaggtg
atgattactcccgatcagatcagcgcgttcccgacgaagaagacaccagtgatgaaggtc
aagtttacacggatgaacttggtcattgtaggcggctgttacgaccccgaacgttag
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