Fusarium oxysporum: FOXG_05050
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Entry
FOXG_05050 CDS
T04882
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
fox
Fusarium oxysporum
Pathway
fox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOXG_05050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fox03019
]
FOXG_05050
Messenger RNA biogenesis [BR:
fox03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FOXG_05050
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
FOXG_05050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
EAD9
WKF
Cep57_MT_bd
Transcrip_reg
DUF7310
DUF1192
Motif
Other DBs
NCBI-GeneID:
28947054
NCBI-ProteinID:
XP_018240016
UniProt:
A0A0J9WKG1
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Position
7:1076652..1081522
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AA seq
625 aa
AA seq
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MAARKLAQEVDKCFKKVSEGVAEFEAIYEKIEQSSNPAQKDKLEDNLKREIKKLQRLRDQ
IKTWAASNDIKDKAPLLEHRKLIETQMEKFKAVEKAMKTKAYSKEGLSAAAKLDPKEQAK
VEASEFLSGMVDELEQQIETLEAEGESIQATMKKGKNNTAKAERIAEVERIIERHKWHQG
KLELIRRSLENGGVEPEQVTDLEESIRYYVSDGMNEDFMEDEEMYEELDLEDEEGTYGMG
ADNEKNSSLDAQSVQEDLTTDNDLPKTLTRKAQKEADPVRRTSSQTKSPLPALATLHAPL
PTISNSNSGTPAMKPASVPTRPAGEGLKYASAAAAAAASDKNNVGIAPLPPPPGAASSSI
SPLPQARSSATNSPATSSAQPASQQPESKQPTPAPAPAEPEPVPAPAPVPVTTKQSKRSK
AAGKQAAVLEAAPSSKAPRTNGTANGVKQTEEEEECIYHLPASLQDLVDTYETSRKRPYP
PSAPSALRMMTASQASCPDIVDADVPRSYRPDQPVPPTGSGFPREPLAIFDDPRLYSRMD
PDTLFYVFYYKQGTAQQYMAAKALKDQSWRFHKQYQTWFQRHEEPKNITEDFEQGTYRFF
DYESTWMNRRKADFKFVYKFLEDEV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaggaaactggcccaagaggtcgacaagtgcttcaaaaaggtctcagagggt
gtggccgaattcgaagctatttacgaaaagatcgaacaatcgagtaatcctgcccagaag
gacaagctagaagataacctgaaacgcgagatcaagaagctccagcgactgagggatcaa
atcaaaacatgggccgccagcaacgacatcaaggacaaggctcccttgctggagcatcgc
aagctgatcgagacgcaaatggaaaagttcaaggccgtggagaaggccatgaagacgaaa
gcatactccaaggaaggtctatcagctgccgccaagctcgatcccaaggagcaggcaaag
gttgaggccagcgaattcttaagcggcatggtcgacgagctggagcagcaaatcgagaca
ctcgaggcagagggcgaatcgatacaagcgaccatgaagaagggtaaaaacaacaccgcc
aaggccgaacgcatcgccgaagtcgaacgcattatcgaacgacataagtggcaccagggg
aagctggaacttatcaggagatccttggagaacggcggagttgagcccgagcaggtgacc
gacctggaagagagcattcgatattatgtgtcggatggcatgaatgaagactttatggaa
gatgaggagatgtatgaggagctcgaccttgaggacgaggaaggcacctacggcatgggc
gcggataacgagaagaactcttccctggatgcgcagtctgtgcaagaggaccttacgacc
gacaatgacttgccgaagacactgacgagaaaggcgcagaaggaggctgacccagtacgg
aggacatcttctcagacaaagtcacctttacctgcactcgcgacactccatgctccgtta
ccgactatcagcaatagcaattcgggtacgccagctatgaagccagcatcagtccctaca
aggcccgctggagaaggactcaagtacgcatcagcagccgctgccgctgcagcgagcgat
aagaacaacgttggtatcgctccgctacctccgccccctggtgccgcatcatcaagcata
tccccattgccgcaagcccgaagcagcgcgaccaactctcctgcgacatcctctgcccag
cccgcttctcaacaaccagagtcaaagcagcccacgccagctcctgctcctgccgagcca
gaacctgtacctgcgccagcccctgtgcctgtcaccacgaaacagtccaagcgatcaaag
gctgctggaaaacaagcagcagtcctcgaggccgctccatcttcaaaggctccacggaca
aatggtacagccaatggtgtcaagcagaccgaggaggaggaagaatgcatctaccacttg
ccagcatcgttacaagatcttgttgacacatatgagacgtcgagaaagcggccatatcct
ccatctgcgccatcagctctgcgcatgatgactgccagccaggccagctgccccgatatt
gtggatgctgatgttccacgatcataccgacccgaccaaccggtacccccaacagggtca
ggatttccccgcgagccactcgctatcttcgatgacccgcggttatactcccgtatggac
cctgacactctgttctacgtattctactataagcagggtactgcccaacagtacatggca
gccaaggctctgaaagatcaaagttggcgattccataagcagtatcagacttggtttcaa
agacatgaggagcctaagaacatcaccgaagactttgagcaaggcacatatcgatttttc
gactatgagagcacatggatgaatcgacgcaaggctgacttcaagtttgtctacaagttc
cttgaggatgaggtctaa
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