Fusarium oxysporum: FOXG_05284
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Entry
FOXG_05284 CDS
T04882
Name
(RefSeq) replication factor A1
KO
K07466
replication factor A1
Organism
fox
Fusarium oxysporum
Pathway
fox03030
DNA replication
fox03420
Nucleotide excision repair
fox03430
Mismatch repair
fox03440
Homologous recombination
fox03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOXG_05284
03420 Nucleotide excision repair
FOXG_05284
03430 Mismatch repair
FOXG_05284
03440 Homologous recombination
FOXG_05284
03460 Fanconi anemia pathway
FOXG_05284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fox03000
]
FOXG_05284
03032 DNA replication proteins [BR:
fox03032
]
FOXG_05284
03400 DNA repair and recombination proteins [BR:
fox03400
]
FOXG_05284
Transcription factors [BR:
fox03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
FOXG_05284
DNA replication proteins [BR:
fox03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
FOXG_05284
DNA repair and recombination proteins [BR:
fox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
FOXG_05284
MMR (mismatch excision repair)
FOXG_05284
DSBR (double strand breaks repair)
HR (homologous recombination)
FOXG_05284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
RADX
zf-like
Motif
Other DBs
NCBI-GeneID:
28947276
NCBI-ProteinID:
XP_018240424
UniProt:
A0A0J9US33
LinkDB
All DBs
Position
7:1757875..1761146
Genome browser
AA seq
608 aa
AA seq
DB search
MDAASALSRGALDVIFNDPDKASKLFPVPVLQCLQVKQMAPSAQGGDRFRLVMSDGQHYV
QTMLATQANHVVHDNKLVRGCIARIKQYTPNNLKGKNILVILDIEVIESLGVQEKIGEPF
AVDSKPAAQEGAIAGGDFYGVKKEESKTQPQQFQQQQQQSMPSRPAMHAGSNIYPIEGLS
PFAHKWTIKARVTSKSDIKTWHKATGEGKLFSVNLLDESGEIKATGFNDQCDAFYDRLQE
GSVYYISTPCRVALAKKQFSNLPNDYELTFERDTVIEKAEDQTNVPQVRFNFCSIQELQS
VEKDNTVDVIGVLKEVGEVGDITSKKDGRPFQKRELTLVDDTGFSVRVTIWGKSANSFDA
PPESVVAFKGTKVSDFGGKSLSLLSSGTMTVDPDIPDAHRLKGWYDSAGRNDTFATHQNM
ASMGNATGRKEDLKTISQVKDENLGMDDQAYYTIKATIVFVKQENFCYPACLSQGCNKKV
TQMPDGTWHCEKCAISHEKPEYRYILSLNVADHTSHQWLSCFDDSGRQIVGRTADEMMEL
KENDDNKFMAAFEEANCKKFTFRCRAKMDNFGEAQRIRYQVMTVTPLDFKSEGTKLDELI
KQYENSSL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagcttcggcgctatcgcgaggcgctcttgacgtgatcttcaatgatcctgat
aaagccagcaagctcttcccggtacctgttctgcaatgtctacaagtcaagcagatggcc
ccttcggctcaagggggagaccgatttcgacttgtgatgagcgatgggcagcattacgtc
cagaccatgcttgctacgcaagccaaccacgtcgttcacgacaacaagctggttcgtggt
tgcattgcccgaatcaagcaatacacacccaacaacttgaagggcaagaacattctcgtc
attctcgatatcgaagtcatcgaatctcttggcgtccaagaaaagattggcgagcctttt
gccgtcgactccaagccagctgcccaagagggtgccattgctggaggcgatttttacggc
gtcaagaaggaagaatcaaagacacagccccagcaatttcaacagcagcaacaacagtcg
atgccctcacgacctgccatgcacgctggcagtaacatctaccctatcgagggtctgtcg
cccttcgcccacaagtggacaatcaaggcacgagttacctctaaatcagatatcaagaca
tggcacaaggccactggggagggaaaacttttcagtgtcaacctgctcgatgagagtggt
gagatcaaggccactggtttcaacgaccagtgtgacgctttctacgaccgcctgcaggaa
ggctctgtctactacatctccacaccttgccgagttgccttggccaagaaacagttttcc
aaccttcccaacgactacgagctcacattcgaacgggacactgtcatcgagaaggcagag
gatcagaccaatgttccgcaggtgaggttcaatttttgctccatccaggaactccagagt
gtggagaaggacaatactgtcgatgtcattggtgtgttgaaggaggttggcgaggttggc
gatattacatccaagaaggatggccgaccattccagaagcgagaattaacacttgtggat
gatacgggcttctcagtccgtgttactatttggggtaagtcggccaactctttcgatgct
cctcctgaatcagtggttgctttcaagggcacgaaggtgtctgattttggtggtaagagt
ctcagtctcctctcttctggcacaatgaccgtcgaccccgatattcctgatgcccacaga
ctcaagggctggtacgactctgctggtcgcaatgacacattcgccacccaccaaaacatg
gcgtccatgggcaatgccacagggagaaaggaagacctcaagaccatttctcaggtcaag
gatgagaaccttggcatggatgaccaggcttactacactatcaaggcgactattgtcttt
gtcaagcaggagaacttttgctatcccgcttgcctgtctcagggctgtaataagaaggtt
acacaaatgcctgatggcacctggcactgcgagaagtgcgctatctctcacgaaaagccg
gaataccggtacatcctctctttgaacgttgcggatcacaccagtcatcaatggctgagc
tgttttgacgattccggtcgacagatcgtgggacgaactgccgacgagatgatggagctc
aaagaaaatgatgacaataaattcatggccgcgtttgaagaggccaactgcaagaagttc
actttccgatgcagggcgaagatggataactttggcgaagctcaaaggatacgctaccaa
gtgatgactgtcacgcccttagacttcaagtctgaaggcaccaagcttgacgagttgatc
aagcagtacgagaacagctcgctatga
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