Fusarium oxysporum: FOXG_05321
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Entry
FOXG_05321 CDS
T04882
Name
(RefSeq) ATP-dependent RNA helicase DBP5
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
fox
Fusarium oxysporum
Pathway
fox03013
Nucleocytoplasmic transport
fox03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FOXG_05321
03015 mRNA surveillance pathway
FOXG_05321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fox03019
]
FOXG_05321
Enzymes [BR:
fox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FOXG_05321
Messenger RNA biogenesis [BR:
fox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
FOXG_05321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Annexin_3
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
28947305
NCBI-ProteinID:
XP_018240491
UniProt:
A0A0J9UVD5
LinkDB
All DBs
Position
7:1879770..1884135
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AA seq
484 aa
AA seq
DB search
MADLASRITKPDEAAADPPAGSAPASTGELGQADGNIEDLGGSGLHEPEWDVEVSLSELQ
NNEATPFHSATTWQDLGLREDILKGLLSLNFLKPSKVQGRSLPLMLSDPPRNMLAQSQSG
TGKTAAFVTAILSRVDFSKPDQPQALALAPSRELARQIEGVINAIGRFIENKKVAAAIPG
ALPRGEPVRASVIVGTPGTVMDIIRRRQLDVSQLRVLVLDEADNMLDQQGLGDQCLRVKN
MLPKDIQVLLFSATFPENVMKYASKFAPNAHSLKLQRSELTVKGISQMFIDCPDDNTKYD
ILCKLYGLMTIGQSVIFVKTRESANEIQRRMVADGHKVSALHAAFDGFERDDLLSKFRQG
ENKVLITTNVLARGIDVSSVSMVINYDIPMKGRGDTEPDAETYLHRIGRTGRFGRVGVSI
SFVYDKKSFDALSKIAEQYGIDLVKLDTEDWDEAEERVKEVIKKNRAQASYAPSATEPKA
TEGA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcttgcgagccgaattacaaagcctgatgaggctgctgcggatcctccagcc
ggcagtgctcccgcctctactggcgaacttggtcaagccgacggtaacatcgaggacctc
ggtggctctggtctccatgagcctgaatgggatgtcgaggtctccctgagcgagctacag
aacaatgaagctactcccttccactctgccaccacttggcaggatcttggcctccgcgag
gatattctgaagggtctcctcagccttaactttctgaagccctccaaggtacaaggcaga
tcacttccgctgatgctcagcgatccgccgcgaaacatgttggcgcagtcccagtctggt
actggcaaaaccgctgcctttgtgaccgcgatattgtcgcgagttgacttcagcaaacct
gaccagccccaagctcttgctcttgcacctagccgagagcttgcgcgacaaattgaggga
gttatcaacgccatcggccgctttatcgagaataagaaggttgctgctgcgatccccggc
gcactccctcgtggagaacccgtcagagctagtgtcattgtcggtactccaggtacagtg
atggacatcattcgacgcagacagttagatgtctctcagctccgcgtccttgtccttgat
gaggccgacaacatgctggatcagcaaggactcggagaccagtgccttcgggtcaagaac
atgctccccaaggacattcaggtccttcttttttcggccaccttccccgagaatgtcatg
aagtatgccagcaagttcgcgcccaacgcccatagtcttaagttgcagcgtagcgagctc
acggtcaagggcatctctcaaatgttcatcgactgcccagatgataacaccaagtacgat
attctttgcaagctttatggattgatgaccatcggccagtcagtcatcttcgtcaagaca
cgagaaagcgccaacgagattcagaggcgaatggtagcagatggtcacaaggtctctgca
ctccatgccgcctttgatggattcgagcgagatgatcttttgtccaaattccgccagggc
gagaacaaggttctcattaccaccaacgttttggctcgtggtatcgatgtttccagtgtg
tccatggttatcaactatgacatccccatgaagggaagaggtgacactgaaccggatgcc
gagacctatctgcaccgtattggccgaaccggtcgattcggccgtgtcggagtcagcatc
agcttcgtttacgataagaaaagtttcgatgccttgagcaagattgccgagcagtatggt
attgacttggtcaagctcgatactgaggactgggatgaggcggaggaacgagtgaaggaa
gtcatcaagaagaacagagctcaagcttcgtatgcccctagtgcaactgagcctaaggct
accgagggtgcctag
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