KEGG   Fusarium oxysporum: FOXG_05462
Entry
FOXG_05462        CDS       T04882                                 
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
fox  Fusarium oxysporum
Pathway
fox03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fox00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FOXG_05462
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fox03019]
    FOXG_05462
Messenger RNA biogenesis [BR:fox03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     FOXG_05462
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     FOXG_05462
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 RRP40_S1 EXOSC1
Other DBs
NCBI-GeneID: 28947438
NCBI-ProteinID: XP_018240748
UniProt: A0A0J9UV20
LinkDB
Position
7:2363948..2367730
AA seq 331 aa
MPITILSPQPPTPRRPHAVAATNSDSDSDSEGGAGIAADDILTPGAEITSNAQWMRGHGT
YVPSGSSSIKSSLAGTLTKTNKLLSVRPLRARYTPEIGDLVVGRIVEVQAKRWRVDVAAS
QLAILQISAINLPGGILRKRTETDELQIRSFFAEGDLVVAEVQQLHQDGAASLHTRSLKY
GKLRNGVFVAVTGTGGGGGVVRSKRQVWTMDVANAGGKVDVLLGVNGYIWISKHIESDPA
AEAAGINRMEENVSSKVYSSQNDPMEVSTMREIARIRSVILALVENGLKVDEDTVTRGYS
EAVDMVRDSIDDDLYLGGKKGQHLAAVLTGR
NT seq 996 nt   +upstreamnt  +downstreamnt
atgcctatcacaatcctcagtcctcagcctcccacgcctcggaggccacatgctgttgcg
gctacaaactccgactctgattccgactcagaaggcggtgctggtattgcggctgacgac
attctcactccaggcgctgagataacttcaaatgcccaatggatgcgtggacatggtact
tacgtgccgtctggatcatcgtctatcaaatcttctcttgctggtaccctcacaaagaca
aacaagctgctctctgtgcggcctctccgagcccgttacactccggagattggtgactta
gttgttggtcggatcgtcgaagttcaggcaaagcggtggcgtgtcgatgtagccgcgtct
cagcttgccattctccaaatttcagccatcaacttacccggtggtattctccgcaagcgt
accgagaccgatgagcttcaaatccgcagtttcttcgccgaaggagatcttgttgtcgca
gaagtccagcagctgcaccaagacggcgccgcgagtctccacacccgcagtttgaagtat
ggtaagcttcgcaacggtgtcttcgtcgctgtcactggcaccggtggtgggggtggtgtc
gttcgatccaagagacaggtctggacaatggatgtggccaacgccggcggcaaggtcgat
gtccttcttggtgtaaatggatacatttggatcagcaagcacatagaaagcgacccggcc
gctgaggcagcgggcatcaaccgtatggaggagaatgttagcagcaaggtctactcgagt
cagaatgatcccatggaagtgtcgaccatgcgcgagattgcgcgaatccgcagcgtcatc
ctggcccttgttgagaacgggctcaaggtggatgaagatacagtgaccagaggatacagt
gaggcagtggatatggtccgtgattccattgatgacgacctgtacctgggaggcaagaag
ggacagcacctagcagccgttttgactggccgttaa

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