Fusarium oxysporum: FOXG_05462
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Entry
FOXG_05462 CDS
T04882
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
fox
Fusarium oxysporum
Pathway
fox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOXG_05462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fox03019
]
FOXG_05462
Messenger RNA biogenesis [BR:
fox03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
FOXG_05462
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
FOXG_05462
BRITE hierarchy
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GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
28947438
NCBI-ProteinID:
XP_018240748
UniProt:
A0A0J9UV20
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Position
7:2363948..2367730
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AA seq
331 aa
AA seq
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MPITILSPQPPTPRRPHAVAATNSDSDSDSEGGAGIAADDILTPGAEITSNAQWMRGHGT
YVPSGSSSIKSSLAGTLTKTNKLLSVRPLRARYTPEIGDLVVGRIVEVQAKRWRVDVAAS
QLAILQISAINLPGGILRKRTETDELQIRSFFAEGDLVVAEVQQLHQDGAASLHTRSLKY
GKLRNGVFVAVTGTGGGGGVVRSKRQVWTMDVANAGGKVDVLLGVNGYIWISKHIESDPA
AEAAGINRMEENVSSKVYSSQNDPMEVSTMREIARIRSVILALVENGLKVDEDTVTRGYS
EAVDMVRDSIDDDLYLGGKKGQHLAAVLTGR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcctatcacaatcctcagtcctcagcctcccacgcctcggaggccacatgctgttgcg
gctacaaactccgactctgattccgactcagaaggcggtgctggtattgcggctgacgac
attctcactccaggcgctgagataacttcaaatgcccaatggatgcgtggacatggtact
tacgtgccgtctggatcatcgtctatcaaatcttctcttgctggtaccctcacaaagaca
aacaagctgctctctgtgcggcctctccgagcccgttacactccggagattggtgactta
gttgttggtcggatcgtcgaagttcaggcaaagcggtggcgtgtcgatgtagccgcgtct
cagcttgccattctccaaatttcagccatcaacttacccggtggtattctccgcaagcgt
accgagaccgatgagcttcaaatccgcagtttcttcgccgaaggagatcttgttgtcgca
gaagtccagcagctgcaccaagacggcgccgcgagtctccacacccgcagtttgaagtat
ggtaagcttcgcaacggtgtcttcgtcgctgtcactggcaccggtggtgggggtggtgtc
gttcgatccaagagacaggtctggacaatggatgtggccaacgccggcggcaaggtcgat
gtccttcttggtgtaaatggatacatttggatcagcaagcacatagaaagcgacccggcc
gctgaggcagcgggcatcaaccgtatggaggagaatgttagcagcaaggtctactcgagt
cagaatgatcccatggaagtgtcgaccatgcgcgagattgcgcgaatccgcagcgtcatc
ctggcccttgttgagaacgggctcaaggtggatgaagatacagtgaccagaggatacagt
gaggcagtggatatggtccgtgattccattgatgacgacctgtacctgggaggcaagaag
ggacagcacctagcagccgttttgactggccgttaa
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