Fusarium oxysporum: FOXG_05520
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Entry
FOXG_05520 CDS
T04882
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
fox
Fusarium oxysporum
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fox03021
]
FOXG_05520
03036 Chromosome and associated proteins [BR:
fox03036
]
FOXG_05520
Transcription machinery [BR:
fox03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
FOXG_05520
Chromosome and associated proteins [BR:
fox03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
FOXG_05520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HTH_44
YqgF
HHH_7
Spt6_S1
Tex_central_region
SPT6_acidic
HHH_9
SH2
S1
HHH_3
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
28947494
NCBI-ProteinID:
XP_018240877
UniProt:
A0A0J9WKY3
LinkDB
All DBs
Position
7:complement(2546662..2552317)
Genome browser
AA seq
1406 aa
AA seq
DB search
MSNSMRDLISGEAELDDEEEDESFDEGGEERRRKAAVEDSSEEEEDDDDEEEARKVREGF
IVDEDEDEEEGGESDGDVRPVHKRKRKHRDREEEEQLDEEDLDLIGEQFGERPKPQTQSK
FKRLKRGYRDEERGNQRRGLDDIFSDEDEDAGEQRPYGRSYRQADEFDDFIEEDFPEDPE
ELEQQREDAEVARPRDRVIGNITDTGNLDKDALDDMEAIFGNGEDYDWALQMEEEEEDRE
REEQAIELKDVFEPSQLKEKLLTDEDNEIRFTDEPERFQLDRKSFKTLQLTAEQFREEAR
WITNQLWPKKGLAADLQIPFGKAVGKVLEFFIVDEVEVPYVFQHRKDYLLHTRKTRNPNR
DDPDAPEYVISADKLLNQDDLWKILELDIKFRSFVDKRNALEKTFENLKGLAIHDTIVEE
MIPEATTMEELQDLQDYLQFQYGPQLKDLAAMAGNLSLTKRPGSKSNLLERVRQGKAYSF
VRAYGISADQLAKNALRHGKKITPDDDAQYPMDLADSLVDDNFDTGDQVINAARQMYSEE
LFASPRMRKHFRNSYYQAAEISCRRTEKGLRRIDDSHPYYEIKYLQNQAIADLVHQPELF
LKMMKAEEEGLVTIKLDMPARYDFRRQLYQEFESENFSDRAEQWREERKKVLDLAYPKLE
RIIAKNVKEVIRTFCQDEVLKMCREEYAKRLDQAPYKPKGMILGTTPRVLVLSNGMADPA
RDPICWAWVEEDGRVIEQGKLGNLARDERQREEFEELVKRRRPDVIGVSGWSAETTKLVR
DLESLVNEKGLMGPEFEDPDTNDYRTEPLEVVVVNDEVARLYKDSPRALAEHPSLNPVTR
YCVALARYMQNPMKEYAALGKDVASISYHPCQNLLPPDKLAKYLDSAMVDMVNLCGVDIN
EAMNDSYTANLLPYVSGLGPRKATSVIKAINANGGAVGTRDELVGDPDSGKLPVVGPRVW
NNCASFLFIEYEATNPASDPLDNTRVHPEDYELGRKMAADALELDEEDVKAETDENGPGA
IVRKLFKQDEQDKVNELVLEEYAEQLERNYSQRKRATLETIRAELQAPYEELRRNFALLS
ASEIFTMFTGETKQTLCEGMIVPINVRVVKDDFAIVKLDCGIEGRIEGHEVSHRSSIKDA
LTSGQTTQAKILDINYKDFMAKLSMRDETLRIPYKRPINLGRDGWDYALEAADKEELREK
DKTTGRTQRVVKHPNFKPFNGLQAEEYLGSQPNGEVIIRPSSKGNDHLAVTWKVADGVYQ
HIDVLEMQKETEFSVGKLLRVGGKYTYTDLDELIVEHVKAMARKVEELMRHDKYQNRSRG
ETEKWLTTYIDANPNRSAYAFCIDTKHPGYFWLCFKASRSARVIALPVRAIPQGFELKGY
QYPDMRALCNGFKLRYQNEFSKMGHR
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacagtatgcgcgacttgatttccggcgaggccgaacttgatgacgaggaagag
gatgagtcttttgatgagggtggtgaggagcgcagacgaaaggctgccgtggaagactct
agtgaggaggaggaagatgacgacgatgaggaagaggctcgcaaggtccgagaaggcttt
attgttgatgaggatgaggacgaggaggaaggcggcgagtcagatggcgatgtgcgcccc
gttcacaaacgaaagcgaaaacatcgcgaccgtgaagaggaggagcagcttgatgaagaa
gatttggatctcatcggcgagcaattcggcgagcgtcccaagccccaaacacagtccaag
ttcaagcgcctcaagcgtggttaccgcgacgaagaacggggaaaccaacgccgtggcctg
gacgatatcttctcggacgaggatgaagacgcaggcgagcagcgaccgtacggcagatca
taccgccaagccgacgagttcgacgatttcatcgaagaggatttccccgaagaccccgag
gaattagaacaacaacgagaagatgcggaggttgctcgccccagagatcgcgttattgga
aatatcaccgatactggtaatctcgataaggatgccttagacgatatggaggccatcttc
ggtaatggcgaagactacgattgggcgctgcaaatggaagaggaggaggaagatcgtgaa
agagaggaacaggccattgagctgaaggacgtgttcgagccgtcgcaacttaaagagaag
ctcttgaccgacgaagataacgagattcgtttcaccgacgagcccgagcgatttcaactc
gaccggaagagcttcaagacccttcagcttactgcagagcagtttagggaggaggcaagg
tggatcacaaaccagttgtggccaaagaaaggtttggcggccgacctccagatcccattc
ggcaaagctgttggcaaggtcctcgaattcttcattgttgacgaagttgaggtgccttat
gtgttccagcaccgcaaagactacctgcttcacaccagaaagacgaggaacccgaatcgt
gatgaccctgatgcgccagaatacgtcatcagtgcagacaagctcttgaatcaagacgac
ctttggaagattttggaattggacatcaagtttcgttcttttgtggacaagagaaatgct
ctcgagaagacttttgaaaatctcaaaggattggcaattcacgacacgattgtggaggag
atgattccagaggcgaccacgatggaagaacttcaagatttgcaagactatttgcagttc
cagtacggtccacagctcaaggacctcgctgctatggctggaaacctctcattaacaaaa
cggccgggctcaaaatcgaacttgcttgaacgagtccgccaaggcaaggcctatagcttc
gtccgtgcttatggaatctcagcggatcagcttgccaagaacgccctgcgacatggaaag
aagatcactcctgatgatgacgctcaatatcccatggacctggctgacagtttggttgac
gacaacttcgacacaggcgaccaagttatcaacgcagctcgacagatgtactcggaagaa
ttgtttgcaagcccaaggatgcgcaaacattttcgaaattcgtactaccaagctgctgag
atcagctgtcgacgaactgagaagggcctacgtagaatcgatgattctcacccatactat
gagatcaagtatttgcaaaaccaagccattgctgatctagtccaccaaccagagcttttc
ctcaagatgatgaaggccgaggaggaaggccttgtcactatcaagcttgatatgccagcc
cgatatgacttccggagacaactttatcaggagttcgagtctgagaacttcagtgaccgg
gccgaacagtggcgagaggagcgcaagaaagtacttgatcttgcataccccaaactcgaa
aggattattgcaaagaatgtcaaagaagtcattcgaactttctgccaagatgaggtactc
aagatgtgtcgagaagaatatgcaaaacggctcgatcaggcaccctacaagcccaagggc
atgatactgggcactacgcctcgtgtcctagttctctccaatggcatggccgatcctgcc
cgcgatcctatctgctgggcatgggttgaggaagatggccgtgtgattgagcaaggaaag
cttgggaaccttgccagagatgagcgccaacgagaagagttcgaggagctggtcaagcgt
cgtcgacccgatgtgattggtgttagcggttggtctgctgagacgactaagctggtacgt
gacttggagagccttgtcaacgagaagggcctcatgggccctgagtttgaggacccagac
accaatgactatcgaacagagccactggaggttgtggtggtcaatgatgaggtcgctcgt
ttgtacaaggatagccctcgtgcacttgctgagcacccaagtctgaatcctgtgacgagg
tactgtgttgctctggcgcgatatatgcagaaccctatgaaggaatatgctgctctcggc
aaagacgttgcctccatttcttaccacccttgccaaaaccttctcccacctgacaaactg
gccaaatacctcgactccgccatggttgacatggtcaacctctgcggtgttgatatcaac
gaggccatgaacgattcctataccgccaaccttcttccttacgtgtctggattgggtccc
cgcaaagcaacaagcgtcatcaaggccatcaacgccaatggcggtgctgtaggcacaagg
gatgaactcgtgggtgatccagatagcggcaagcttcccgttgttggccccagggtttgg
aacaactgcgcaagctttctgtttatcgaatacgaggccacaaatcctgcttcggacccc
ctagacaacacacgagttcatcctgaagattatgagctcggacgtaaaatggctgccgat
gctcttgagcttgatgaagaggatgtcaaagccgaaactgacgagaatggacccggagcg
atcgtccgcaagctgttcaagcaggatgaacaagacaaggtcaacgagctagtcctggaa
gagtatgcagagcaattggagagaaactacagccagcgcaagcgagctacgttggagaca
attcgtgccgaactccaggcgccctacgaagaacttcgacggaattttgccctcctgtca
gcatccgagatcttcaccatgttcactggtgagaccaagcagactctatgcgaaggcatg
attgtacccatcaatgttcgggttgtgaaggatgacttcgccattgttaagctcgactgt
ggtatcgaaggccgtattgagggtcatgaagtcagccatcgttcgtccatcaaggatgcc
ctgacctctggacaaacgacgcaggcaaagattttggacatcaattataaagactttatg
gccaagctatcaatgcgggatgaaaccctacgtattccgtacaagcgcccgatcaacctc
ggtcgagatgggtgggactacgcccttgaagcagcagataaagaggagctgcgagaaaag
gacaagaccaccggacgaacccagcgtgttgtcaagcaccccaatttcaaaccattcaat
ggcctgcaagcagaagaatatctgggatcgcagcccaacggggaggttatcattcgaccc
tcatccaagggtaacgatcatctggcagtgacctggaaggtcgcggacggtgtttaccaa
cacattgacgtcctggagatgcagaaagaaacagaattctcggtcggcaagctgctgcgc
gtgggcggcaaatatacgtacactgacctggacgaactgatcgtggagcacgtcaaggcc
atggcgcggaaagtggaggaactgatgcgacacgataagtatcagaaccgatcccgggga
gagacggaaaaatggcttacgacgtacatcgacgccaatcccaaccgatcggcttacgcg
ttctgcatcgacacgaagcatcctggatacttttggttgtgcttcaaggccagtaggtcg
gccagggtgattgcattgccggtgcgcgcgattccacagggctttgagctcaaggggtat
caatatcctgatatgcgagcgctatgcaacggatttaagctgcgttatcagaatgagttc
tccaagatgggtcaccggtag
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integrated database retrieval system
