KEGG   Fusarium oxysporum: FOXG_05842
Entry
FOXG_05842        CDS       T04882                                 
Name
(RefSeq) hypothetical protein
  KO
K11600  exosome complex component RRP41
Organism
fox  Fusarium oxysporum
Pathway
fox03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fox00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FOXG_05842
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fox03019]
    FOXG_05842
Messenger RNA biogenesis [BR:fox03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     FOXG_05842
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     FOXG_05842
SSDB
Motif
Pfam: RNase_PH RNase_PH_C SCO4226-like
Other DBs
NCBI-GeneID: 28947788
NCBI-ProteinID: XP_018241352
UniProt: A0A0J9WL78
LinkDB
Position
2:779941..784373
AA seq 268 aa
MPLDTSTYSLALLRVDGRRWNELRRLHAQIRTQDAADGSSYLEMGHTKVMCIVTGPSEQQ
VQRRGGQQAPRDTAAINVNVVVAGFSSVDRKKRGRNDKRIQEIETTIANAFTSNLHTHLF
PHSSITISLHVLSQDGSLLAALLNATTLALIDAGIPMTDYIAACTAGSTSTYAAGDDTAD
PLLDLNNQEEQELPFLTVATQGDTDQVAVLVCESRVQVSRLEGMLVVGVDGCKQVKQFLD
QVVKDKGAEMVKEGAVEKNDAMGMDLDD
NT seq 807 nt   +upstreamnt  +downstreamnt
atgcctctcgatacgtcaacatactcattagcgctcctgcgcgtcgacggaagaagatgg
aacgaactccgtcgtctgcatgctcaaatccgaactcaagatgctgctgacggttcatca
tatcttgaaatgggccatacaaaagtcatgtgcatcgtgacaggcccttcagagcagcag
gttcaaagacgtggtggacagcaagctcctcgcgacacagcggctatcaacgtcaatgtt
gtagtagcgggtttttcgagcgtggatcgaaagaagagagggcgcaatgacaagcgcata
caagagattgaaacgacgattgcgaatgcgtttacttcgaatttacatacacacctgttt
cctcactcttccatcacaatctcgcttcacgttctatcgcaagacggatccctcctcgcc
gctcttctcaacgcaacgaccctcgccctcatcgacgctggtattccaatgacagattat
atcgccgcctgcacagcaggatcgacctcaacatacgccgcgggcgacgacacagccgat
cctctccttgatctaaacaaccaagaagagcaagaactacccttcttgacagtcgcgaca
caaggtgataccgatcaggttgctgtactcgtatgcgagagtcgtgtgcaggttagcagg
ttggagggaatgttggtcgtcggtgtggatggttgtaagcaggtaaagcagttcttggat
caggttgttaaggataagggtgctgagatggtgaaggagggtgcggtggagaagaacgat
gctatggggatggatttggatgattag

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