Fusarium oxysporum: FOXG_07544
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Entry
FOXG_07544 CDS
T04882
Name
(RefSeq) ATP-dependent RNA helicase FAL1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
fox
Fusarium oxysporum
Pathway
fox03013
Nucleocytoplasmic transport
fox03015
mRNA surveillance pathway
fox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOXG_07544
09122 Translation
03013 Nucleocytoplasmic transport
FOXG_07544
03015 mRNA surveillance pathway
FOXG_07544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fox03019
]
FOXG_07544
03041 Spliceosome [BR:
fox03041
]
FOXG_07544
03009 Ribosome biogenesis [BR:
fox03009
]
FOXG_07544
03012 Translation factors [BR:
fox03012
]
FOXG_07544
Enzymes [BR:
fox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FOXG_07544
Messenger RNA biogenesis [BR:
fox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
FOXG_07544
mRNA cycle factors
Stress granule specific factors
FOXG_07544
Spliceosome [BR:
fox03041
]
Complex C
Other components
EJC/TREX
FOXG_07544
Ribosome biogenesis [BR:
fox03009
]
Eukaryotic type
90S particles
Helicases
FOXG_07544
Translation factors [BR:
fox03012
]
Eukaryotic type
Initiation factors
eIF-4
FOXG_07544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
TniB
COG4_N
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
28949226
NCBI-ProteinID:
XP_018243240
UniProt:
A0A0J9V1M8
LinkDB
All DBs
Position
4:463784..465487
Genome browser
AA seq
402 aa
AA seq
DB search
MAESAGGIDRKADERMEFSTSKEVTVHPTFESMSLKENLLRGIYAYGYESPSAVQSRAIV
QVCKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALG
DYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEAD
ELLNKGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEG
LKQYFIAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGD
MPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGR
FGRKGVAINFVTTEDVRILRDIELYYSTQIDEMPMNVADLIA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaagcgctggaggaattgaccgaaaggccgatgagaggatggaattttccacc
tccaaggaggttacggtccatcctactttcgaatcgatgtcgctgaaggagaacttgctt
cgtggaatttacgcttacggatacgagtcgccttctgctgttcagtctcgagctatcgtt
caggtctgcaagggtcgcgacaccattgctcaggcgcagtctggtaccggaaagacagct
accttttccatcagtatgctgcaggtcatcgataccgcggtgcgagagacacaagctctt
gttctgtcaccgacacgagaattggctactcagattcaatccgttgtcatggctctgggc
gactacatgaacgtgcaatgtcacgcttgtattggaggcacaaacgttggagaggatatc
cgcaagctcgactacggtcaacacatcgtctcaggcactccaggccgtgtggccgatatg
attcgacgacgacacctgcgcaccagacacatcaagatgctggtcctcgatgaggccgat
gagcttcttaacaagggattccgcgagcagatctatgatgtgtaccgatacctccccccg
gccactcaagtcgtggtcgtcagtgccaccctcccatacgacgttctcgacatgacgacc
aaattcatgaccgatcccgttcgcattctcgttaagcgtgacgaactgaccctcgaaggt
ctcaagcagtacttcatcgccgtcgagaaggaggactggaaattcgacaccctatgcgat
ctctacgacacccttaccatcacgcaagccgtcatcttctgcaacacccgacgcaaggtc
gactggcttaccgacaagatgcgcgaggcgaactttacagtcagcagtatgcacggcgac
atgcctcagaaggagcgagacagcatcatgcaggatttccgacagggcaacagccgtgtt
ctcatctcgactgatgtgtgggctcgtggtatcgacgttcagcaggtcagtttagttatc
aactacgaccttcctagtaaccgtgagaactacatccaccgcattggtcgaagtggtcgg
tttggtcgcaagggtgttgctatcaactttgttactactgaagatgtgcgcatcctgaga
gacattgagttgtactactctacccagatcgatgagatgcccatgaacgttgccgacctt
attgcataa
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