Fusarium oxysporum: FOXG_07707
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Entry
FOXG_07707 CDS
T04882
Name
(RefSeq) transcription initiation factor TFIIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
fox
Fusarium oxysporum
Pathway
fox03022
Basal transcription factors
fox03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FOXG_07707
09124 Replication and repair
03420 Nucleotide excision repair
FOXG_07707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fox03021
]
FOXG_07707
03400 DNA repair and recombination proteins [BR:
fox03400
]
FOXG_07707
Transcription machinery [BR:
fox03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FOXG_07707
DNA repair and recombination proteins [BR:
fox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FOXG_07707
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Zn_ribbon_GTF2H2
DUF4796_N
Motif
Other DBs
NCBI-GeneID:
28949377
NCBI-ProteinID:
XP_018243446
LinkDB
All DBs
Position
4:complement(<924776..926439)
Genome browser
AA seq
468 aa
AA seq
DB search
MADSDGEYVADMSDDDLMDHRVTDDDPQAAKGKTAKSRKGDSARAWEVSKRTWETNLPEE
EDGILSLTALEAEKRKRLLRDTTPLQRGIIRHMVLVLDMSFAMTEKDLLPTRYRLMLSYA
AAFVREFFEQNPISQLGIIGMRDGVAVRISDVGGNPTEHLEKLKGLENEDPQGNPSLQNA
LEMCRGALFHAPSHGTREVLIIYGALLSSDPGDIHETIGNLITDRIRVSIVGLSAQVAIC
ADLCSRTNAGDESQYNIAMDEVHFRELFLAATTPPVTRTAEQSTASLLMMGFPSRTLVPN
GTTSYCACHNRPFREGYLCTRCGARVCRIPAECPACDLTLILSTHLARSYHHLFPLRNWV
EVPWTKASRSAACFSCLAPFPEPPKGKAPDKSREDSGAPKTAKGVSESGRYACEVCGQHF
CIDCDVFAHEVVHNCPGCQSLLSKTDAAASSGEPNGTAAYTNGDVVMT
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggccgactctgacggcgagtatgtcgccgacatgtcggatgatgatctcatggatcac
cgcgtcacagacgacgatcctcaagcggcgaaaggaaaaactgccaaatcgagaaaaggc
gactcagctagagcatgggaagtctcgaaacgaacttgggagacgaatctaccagaggaa
gaagacggaatactgagtctcacagcgcttgaggctgagaagcggaagcgattattacgc
gatacgacgcccctacaaagaggaattattcggcatatggtgcttgtgctggatatgtcc
ttcgctatgaccgagaaggatctgctacctacaaggtatcgcctcatgctgagctacgcg
gctgcctttgtgcgagagttctttgaacaaaatcctatttctcaactaggaatcattggt
atgcgagatggtgttgctgtgaggattagcgatgttggaggaaacccgacagaacacttg
gaaaagctgaaagggctggagaacgaagatcctcaaggcaacccaagcttgcagaacgct
ctggagatgtgtcgaggagctctgttccatgcgccttctcacggcacacgagaagtactc
attatctatggcgcattactatcgagcgacccgggcgatatccatgaaaccattggcaat
ctgatcacggatcgaatacgtgtctcgattgtcggtctttccgcccaggtcgctatttgc
gctgatctgtgttcacgaacgaatgccggtgatgagtcacaatacaatatcgcgatggac
gaggtccatttccgcgaacttttcctcgcagccacgacaccccctgtgacacgcacggct
gaacagagcacagccagtcttctcatgatgggcttcccgtcccggacacttgttcctaac
gggactacaagttactgcgcgtgccataatcggccgttccgagagggatatctctgcacc
cgttgcggcgctcgtgtgtgccgcatcccagctgagtgtccagcttgtgacctcaccctt
attctatcgactcatcttgcccgctcatatcatcatctcttcccgttacggaactgggtt
gaagtgccctggactaaagccagccgctctgcagcttgcttttcatgcttagcgccattt
cctgagccaccaaagggcaaagcacccgataagtctagagaagacagtggcgcaccaaag
acagccaagggtgtcagtgaaagcgggcgatatgcatgtgaagtgtgtggacaacacttt
tgcatcgactgtgacgtctttgcccatgaggttgtccacaactgcccgggctgccagagc
ttattatctaagacagatgccgctgcctcatcgggtgagccgaacggcacagctgcatat
accaacggtgatgttgtaatgacatag
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