Fusarium oxysporum: FOXG_08074
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Entry
FOXG_08074 CDS
T04882
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
fox
Fusarium oxysporum
Pathway
fox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOXG_08074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fox03019
]
FOXG_08074
Messenger RNA biogenesis [BR:
fox03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
FOXG_08074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_16
TPR_22
TPR_1
TPR_2
TPR_8
TPR_14
TPR_CcmH_CycH
TPR_17
TPR_12
TPR_11
TPR_7
ARM_TT21_N
ARM_TT21_5th
TPR_6
ANAPC3
ARM_TT21_C
PPTA
TPR_Slam
TPR_10
T7SS_EccA1_N
ARM_TT21
HrpB1_HrpK
ChAPs
EST1_DNA_bind
TPR_COPA_B
7TMR-HDED
DUF4192
Motif
Other DBs
NCBI-GeneID:
28949727
NCBI-ProteinID:
XP_018244005
UniProt:
A0A0J9V3U2
LinkDB
All DBs
Position
4:complement(1999643..2005169)
Genome browser
AA seq
1421 aa
AA seq
DB search
MSGTKAALKAINDAIRQQKFDDAVSKAKELLEKDPKNYQAHIFLAFALDKKDRLDLAQET
YRSATWLRPQEAQAWQGLIKLFEKQSNKKLADYHQAVVNLAQIHRDADDMYKCQDVVDKF
IDFARVQGDETQYAEALSIQLPESPLYPILEGRFPHPAKTYETIAHILEKAEKHRINTLI
GERRTKLGAKLTEVTLDAKREVYSQSKLEHIYRQLINWTNDDDLRRQYEEKLLQLCYDRL
LVAPTGPEKDAERQKVLDLANGMVAIKYPYKLAWDISIEWQDKKEIREWDVDVLRAYCSF
FPDSDLYKVITSYLTSPISPFPPEKPQEKAKAALNESDESSDDDDGGVPTLVVPLTDEDR
LIMITEGITTADSILAYRLTGQYLLHIGEYESTVELMRKGLALLIQERKKTGLSFANAED
SYYLSLGTALVYYQSPRHHKEAKELFDKVLERDNTSTSALIGVGLIYEEEEEYDEAIEYL
TRALERDQTNIRVKSEAAWVKALKGDWQTAKDELHECLEPLEKQGTASKELLGETQHRLG
VCLWNIDTSKAARKQRKGESAYAYWLNALNNNLNYAPTYTYLGTYYADYAKDKGRSRRCF
QKALELSHAEVVAAERLARSFADDGDWDRVELVARRVVDSGKVKPPPGSKRKGISWPFAA
LGVAELNKQDFHKAIVSFQAALRISPEDYHSWVGLGESYHSSGRHIAATKAILNAQRLEE
ETEADISGDTWFTKYMLANIKRELGEYDESIALYRSVIETHPGEEGVIIALLQTTVDNAL
SSVEKGLFGKAVQLATETIEYAKTTEGSVLETFNFWKAIADACSVFSSVQSRTRDLPCES
ISELLKKGSQDAYEIFASVDKVGTDVVFAKGLYADDEQPGVDLTRCIHATILCHKQGVHI
SSNDRHAQAVAYYNLGWAEHRAHICLPSEIRKKSSSYVKAAVRSFKRAIELEAGNSEFWN
ALGVVTSEINPTVAQHAFARSLYLNERSPAAWTNLGTLALLSGDVELANEIFTRAQSTDP
DYAHAWLGQGFVALLHGDAKEARGLFTHAMEIADASSVPTRRHYSSSLFDHILSSPPNEI
NVESLIQPLFALNQYQSLKSDDLAFGHLTTLFQERTRESSRAVDALEKISSSVEADYEST
ESPQSLAKFALAKTDLARAYLASGSYEKAVECGELALGLSSEEAENELSSEQRKRARLSA
HLTVGLAQYYNNQFDEAITYFESALEESDGNPDAVCLLAQVLWAQGAESSRERAREALFE
VIEKHPEHVQSVLLLGVVALLDNDEDSLEAVVEELNGLRTNHKVTASEQSHIGEVLRAIA
TLGEGRTEEDMRTQVQTDIMLYPDLPHGWSALAQSTGDEYAAQMALKVAARGIPPKGLLE
AQDLAKAYAGTYTAGDAQRAAFLAPWEQSGWTSLAAATEGI
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggacaaaggcagccctcaaggccattaacgatgctattcgccagcaaaagttt
gacgatgcggtgagcaaggcaaaggagctactggaaaaggatcccaagaactaccaagct
cacattttcctagcctttgccttagataagaaggacaggcttgacctagctcaggagact
tatcgatctgcgacgtggcttcgtccccaggaggcacaagcatggcagggtttgatcaag
ctctttgagaagcaaagcaacaagaagctggcagattaccaccaggcagtcgttaatttg
gcgcagattcatcgagatgctgatgatatgtacaaatgtcaagatgttgtggacaaattt
atcgactttgcaagagttcaaggtgatgagacacaatatgctgaagcactttcgatccaa
ctgccggaaagccctctataccctatccttgagggccggttccctcacccagcaaagaca
tatgagacgatagcgcacatcttagagaaggctgagaaacaccggataaatactctcatc
ggagagcgacgaaccaaactgggcgctaaactcaccgaggtcacccttgacgccaagcgg
gaagtttacagccagagtaaacttgagcacatttatcgacaactcatcaactggacaaat
gacgatgatttgagacggcagtatgaagaaaagcttctccagctttgttatgatcgtctc
ctggtcgctccaacgggccctgaaaaggacgctgaacgtcagaaagtgctcgatcttgcc
aacggcatggttgccataaaatatccttataagcttgcttgggatatttctatagagtgg
caggacaagaaggagattcgagaatgggacgtggatgtcctccgagcttactgttcattc
tttcccgacagtgatctttacaaagttatcacaagctacctgacaagcccaatctcacca
ttcccaccggagaagccacaagaaaaggcgaaggcagccctgaatgagtcagacgaaagt
tccgacgacgacgatggtggagtccctacccttgtggttcctttgaccgatgaggatcga
ctcatcatgataaccgaaggcattactactgctgattctattctcgcgtaccgactcact
ggccaatatcttcttcacattggagagtatgagagtactgttgagcttatgcgcaaggga
ttggctctattaatacaggagcgtaagaagacaggcctttcattcgcaaatgccgaagac
tcttattacctttcgctcggaacagcactagtctattaccagtcccccagacatcacaaa
gaggcgaaggagctgttcgacaaagttctggagcgggataacacctccacttccgccttg
atcggcgttggtctgatttacgaggaagaagaggagtacgatgaagctatcgagtatctt
actcgggctttggaacgtgatcaaacaaacatcagggtaaagtctgaggccgcctgggtc
aaagcactcaagggagattggcaaaccgcaaaggatgaactgcacgaatgtctggagccg
ctggaaaaacaaggcactgcatcaaaggagttgctgggtgagacgcagcatcgcctggga
gtatgcctctggaacatcgataccagtaaggctgcacgaaaacaacgaaaaggagagtcc
gcgtacgcatactggcttaatgccctgaacaacaacctcaattacgcacccacatacacg
tacctaggaacatactatgccgactatgcgaaggataaaggcagatcgcgacgttgcttc
cagaaagcactggagctgtctcatgccgaagtggttgcagccgaaagacttgcacgctct
tttgcggacgacggagactgggatagagtcgagctcgtcgcccgccgagttgttgactct
ggcaaggtaaagccgccaccaggatctaagaggaagggcattagctggccatttgctgca
ctcggcgtggctgagctcaataagcaagacttccataaggctattgtgtctttccaagca
gcgcttcgtattagccccgaagattaccattcctgggtcggtctcggggagagctaccac
agttccggtcggcacatcgctgccactaaggctattctgaatgcacaaaggctggaggaa
gaaactgaagcagatatttctggagacacctggtttaccaagtatatgcttgctaacatt
aagcgtgaactgggcgagtatgacgaatctatcgctctctacaggtccgtcattgagacg
caccctggggaggagggtgttattatcgccttgctccaaacaacagtcgacaacgccctt
tcatctgtcgagaaaggattattcggaaaagcagtccagcttgcaaccgagaccattgag
tatgcaaagacaaccgaaggcagtgttcttgagactttcaacttctggaaagccatagct
gatgcatgctctgtcttctcttctgttcagagtcgcacgcgtgatttgccctgcgaatcc
attagtgagcttctcaagaagggctcacaggacgcttatgagattttcgccagtgttgac
aaggttggcactgatgtggtcttcgcaaagggcttgtatgcagatgatgagcagcctggg
gttgatctcacccgatgtatccacgctacgattttgtgccacaagcaaggtgttcacatt
tcgtctaatgatcgccacgcgcaagccgtggcttattacaatttgggatgggcagaacat
cgcgcgcatatttgcctgccatctgagatcaggaagaagtccagcagctacgtcaaagct
gcggtgaggtcattcaagcgtgctatcgagttagaagctggaaattcggagttttggaat
gcccttggtgtagtaaccagcgagatcaaccctacagtagcacagcatgctttcgcccga
agtctgtacctaaacgagagaagccctgcggcctggacgaatttgggaactctcgccctt
ttgtccggagatgttgagctggctaacgagatcttcacgagggcccagtcaactgaccct
gactatgcacacgcttggctaggacaaggatttgtggctcttcttcatggtgatgccaaa
gaagcccgaggactattcacccatgcaatggagattgcagatgcatcttcagtacctacc
aggcgtcactactcaagctccctcttcgatcatattctttcatcgcctcccaatgaaatt
aacgttgaatcgctcattcaaccactcttcgctctcaatcaatatcaaagcctcaaatct
gatgacctggcatttggtcacttgacgacactatttcaagagcgtaccagagagagcagc
cgtgctgttgatgcactagaaaagatctcctcgagcgttgaggccgattacgaaagcacc
gaatcccctcaaagtctcgccaagtttgctctggccaaaacggatctagcacgagcatac
ctcgcttctggttcatacgagaaggcagttgagtgtggcgagctagcactaggcttgagc
agcgaggaggcagagaacgagctctcaagtgaacaacgcaagagagctcgcttgtctgca
catctcactgtaggattggcacagtactacaacaaccagttcgatgaagcgatcacgtat
tttgagtctgctctggaggagtctgatggcaaccccgatgctgtatgcttgttggctcaa
gtactttgggctcagggagccgagtcgtctcgagagagagctcgtgaagcactgtttgag
gtgatcgaaaaacatcccgaacatgtacagtcagttcttcttcttggtgtggtggctttg
ttggacaatgacgaggattctttggaagcagtggtcgaagaacttaacggtcttcgcacc
aatcacaaggtaacagcctcagagcagtcgcacattggtgaagtactacgggccattgcc
acgcttggagaaggacgcacggaagaggatatgagaacacaggtacagacagatatcatg
ctctaccctgacctacctcatggttggtctgctctggcccaatctacaggcgatgagtac
gcggctcagatggcgctcaaggtcgcagcaaggggcattcctccaaaggggttattggaa
gcacaggatctagcaaaggcatatgctggaacatatactgctggagatgctcagcgagca
gcgttcttggcgccttgggaacagagtggctggacatcgctggccgctgccactgagggc
atttaa
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