Fusarium oxysporum: FOXG_10639
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Entry
FOXG_10639 CDS
T04882
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
fox
Fusarium oxysporum
Pathway
fox03020
RNA polymerase
fox03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FOXG_10639
09124 Replication and repair
03420 Nucleotide excision repair
FOXG_10639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fox03021
]
FOXG_10639
03400 DNA repair and recombination proteins [BR:
fox03400
]
FOXG_10639
Enzymes [BR:
fox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FOXG_10639
Transcription machinery [BR:
fox03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
FOXG_10639
DNA repair and recombination proteins [BR:
fox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
FOXG_10639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
RNA_pol_Rpb2_4
POP1_C
Motif
Other DBs
NCBI-GeneID:
28952099
NCBI-ProteinID:
XP_018248488
UniProt:
A0A0J9VH79
LinkDB
All DBs
Position
7:3840192..3844693
Genome browser
AA seq
1270 aa
AA seq
DB search
MDDYENESDYDYGYDEGITPEDCWTVISSFFETKGLASQQTDSFDEFTQTMVQDLVNEYS
TITLDQHNPPAPPGVNIALRRYEIKFGSVMVSRPSMSETDGTVTNLLPYECRDRNLTYAA
PTYLKITKKVAVAVDKEIPLHEMDDEQQAEYKRTGENPTKLVWEVEEDAGSIKAEDEPSE
MIFIGKMPIMVKSKICHLSSHSDEDLFMLNECPYDQGGYFVINGSEKVLIAQERSAANIV
QVFKKAQPSPYTYTAEIRSALEKGSRLISSLTMKLYGKGDSARGGFGQTIQATLPFVKAD
LPVAIVFRALGVVSDEDILNHICYDRNDSQMLEMLRPCIEEAFCVQDREVALDFIGKRGN
RDQASLGREKRVRVAKDILQKETLPHISQSEGSETRKAFFLGYMVHKLLQCALGRREPDD
RDHFGKKRLDLAGPLLAKLFRGIIRRINTELSNYLKRCVESNRNFNLTVAIKPSTLSNGL
KYSLATGNWGDQKKAASSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQLHNT
HWGLVCPAETPEGQACGLVKNLSLMCYVSVGSPADPLIEFMINRGMEVVEEYEPTRYPHA
TKIFVNGSWVGVHADPKHLVNQVLDTRRKSYVQFEVSLVRDIRDREFKIFSDAGRVMRPV
FTVHQEDDYENNITKGQLVLTKDHVNRLAQEQAEPPANPADKFGWDGLIREGAVEYLDAE
EEETAMICMTPEDLELYREQKNDEATLTEEEKRAKQEAEKREQEEDRNKRLKTKVNPTTH
MYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGFFLTNYSRRMDTMANIL
YYPQKPLATTRSMEFLKFRELPAGQNAIVAIACYSGYNQEDSVIMNQSSIDRGLFRSLFF
RSYSDQEKKVGLNYTEIFEKPFQQTTLRMKHGTYDKLDEDGIVAPGVRVSGEDIIIGKTA
PIDQENQDLGTRTQSHQRRDISTPLRSTENGIVDQVILTVNADNVKYVKVRVRTTKIPQI
GDKFASRHGQKGTIGVTYRQEDMPFSREGLTPDIIINPHAIPSRMTIAHLIECLLSKVST
LEGMEGDATPFTDVTVDSVSELLRKHGYQSRGFEVMYNGHTGRKLRAQVFFGPTYYQRLR
HMVDDKIHARARGPVQIMTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFEVSD
AFRVHVCEICGLMTPIANLSKQSFECRPCKNKTKIAQIHIPYAAKLLFQELQAMNIAARM
FTNRSGVSNR
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggacgactacgagaacgaatccgactacgattatggctacgatgagggtatcaccccc
gaggattgctggaccgtaatctcgtccttcttcgagacaaagggtcttgcatcgcaacag
accgactcctttgacgagttcacccagacaatggtgcaggatctcgtcaacgagtactcc
accatcaccctcgatcagcacaaccctcctgcgcctcctggagtcaacatcgccttgcga
cgatatgagatcaagtttgggagcgtcatggtgtcacgtccttctatgagcgagactgat
ggaactgtgaccaacctcctaccttacgaatgtcgtgaccgcaacctcacctatgccgcg
ccgacctacctcaagatcaccaagaaagtcgccgtcgcagtcgacaaggagattcctttg
cacgagatggatgacgagcagcaggcggagtacaagcgaaccggcgaaaaccccacaaag
ctggtatgggaagtcgaggaggatgctggaagcataaaagctgaggatgagccttcggag
atgatctttatcggaaaaatgcccatcatggtcaagtccaagatttgccatctgagcagc
cattcggatgaggacctcttcatgctcaacgagtgtccttatgatcagggcggttacttc
gttatcaacggtagtgagaaggtcctgatcgcccaggaacgttctgccgccaacattgtt
caagttttcaagaaggcccaacctagtccttacacctacactgctgaaatccgcagtgct
cttgagaaaggttcccgtcttatctccagtcttacgatgaagctctatggcaagggagat
tctgcacgaggtggctttggccaaactatccaggctaccctgccttttgtcaaggcagat
ctccctgtcgccatcgtcttccgagcacttggtgttgtgtctgatgaggatattctgaac
cacatttgctacgaccgcaacgatagccagatgctggaaatgcttcgcccttgtattgag
gaggctttctgtgtccaagaccgagaagttgcccttgactttatcggaaagcgtggaaac
agagaccaggctagtctcggtcgtgagaagcgtgttcgtgttgcaaaggatattctccaa
aaagagactctgcctcatatctcccaatcagagggtagcgaaacccgtaaggccttcttc
ttgggttacatggtgcacaagctgctacagtgcgctcttggacgtcgtgagcccgatgat
cgtgatcactttggaaagaagcgacttgatttggcgggccctctactggcgaagctcttc
cgtggtatcattcgaaggataaacactgagctctctaactacctcaagcgatgtgttgag
agcaaccgaaacttcaacctgactgtcgctatcaagccatcaaccctttccaacggtctc
aagtactctttggccactggtaactggggtgaccagaagaaggcggcaagctcgacagcc
ggtgtctctcaggtgttgaacagatatacctttgcttctactctttcacatttgcgtcga
accaatactcccatcggacgagatggtaaattggccaagcctcgacagcttcacaacact
cactggggtttggtgtgtcctgccgaaacgcctgagggtcaagcttgtggtctggtcaaa
aacttgtctctgatgtgttacgtcagtgtcggctctccagccgatcctctgattgaattc
atgatcaacagaggcatggaagtcgttgaggagtacgagccgacaagatacccccacgct
acaaagattttcgtcaacggtagctgggttggtgttcatgccgaccccaagcatctcgtg
aatcaggtcttggacacaagacgaaagtcttacgtgcagttcgaagtatcacttgttcgt
gatatccgagaccgtgaattcaagattttctcagacgctggccgtgtcatgagacccgtc
tttacagttcatcaggaggatgactatgagaacaacatcaccaagggacaactagtgttg
acaaaggaccatgtcaataggctagcccaagaacaggcagagcctcctgccaacccagcg
gacaagtttggatgggatggcttgatccgcgaaggagctgtcgagtatctcgatgctgag
gaagaagagacagccatgatttgcatgacgccagaggatctcgaactttaccgtgagcaa
aagaatgatgaagctacactcacagaagaagagaaacgggccaagcaagaggcagagaag
agagaacaagaggaggaccgcaacaagcgattgaagacaaaggtgaaccccacaactcac
atgtacacacattgtgagattcaccccagtatgattctcggtatctgtgccagtatcatt
cctttccccgatcacaaccagtctcctcgtaatacctaccaatctgctatgggtaaacaa
gccatgggtttcttcttgacaaattactctcgccgcatggacaccatggccaatattctc
tactaccctcaaaagcctctcgccactacccgatctatggagttcctcaagttccgtgaa
ttgccagccggtcaaaacgccattgttgcaattgcttgctactcaggttacaaccaggaa
gattccgtcattatgaaccagagtagtattgatcgaggtctgttccgaagtctgttcttc
cgatcgtactcagatcaggagaagaaggttggtctcaactacactgagatctttgagaaa
cctttccagcagacaacgcttcgaatgaagcatggaacatacgacaagcttgatgaagat
ggtatcgtggctcctggtgtccgtgtgtcaggtgaagatatcattatcggcaagactgca
cccatcgaccaagaaaaccaggaccttggcacaagaactcaatcgcaccaacgtcgtgat
atctcgacaccactgcgaagtactgagaacggtatcgttgatcaagtcattctgacagtc
aacgccgataacgtcaagtacgtcaaggtccgagtacgaacaaccaagattcctcaaatt
ggtgacaagtttgcttctcgtcacggtcaaaagggtacaatcggtgttacatatcgacag
gaggatatgcctttcagccgagaaggtcttactcccgatatcattatcaaccctcacgcc
attccatcgcgaatgacaattgcccatttgattgagtgtcttcttagcaaggtttcaacg
ctggaaggtatggagggtgacgccacaccgttcactgatgtcacagtcgattcagtctca
gaacttctgaggaagcacggttaccaatctcgaggtttcgaggtcatgtacaacggtcac
actggacgaaagctccgtgcccaggtgttcttcggacctacctactaccagcgtcttcgt
cacatggtggacgacaagattcacgctcgtgctcgtggtccagttcagatcatgacccga
caacctgttgagggtcgtgctcgtgatggtggtctccgattcggagaaatggaacgtgat
tgtatgatcgctcacggtgccgctgctttcctgaaggagcgtctgtttgaggtgtcggat
gctttccgtgtccacgtctgcgagatttgtggactcatgacaccaattgcaaacctttcc
aaacagtcattcgaatgccgaccttgcaagaacaagaccaagatcgcgcaaatccatatt
ccctacgccgccaagctgctcttccaggagctgcaggccatgaacatcgccgcaagaatg
tttaccaacagatctggagtttcaaaccgataa
DBGET
integrated database retrieval system
