Fusarium oxysporum: FOXG_11251
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Entry
FOXG_11251 CDS
T04882
Name
(RefSeq) hypothetical protein
KO
K14328
regulator of nonsense transcripts 3
Organism
fox
Fusarium oxysporum
Pathway
fox03013
Nucleocytoplasmic transport
fox03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FOXG_11251
03015 mRNA surveillance pathway
FOXG_11251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fox03019
]
FOXG_11251
Messenger RNA biogenesis [BR:
fox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
FOXG_11251
mRNA cycle factors
P-body specific factors
FOXG_11251
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
28952664
NCBI-ProteinID:
XP_018249338
UniProt:
A0A0J9VJR7
LinkDB
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Position
1:1298707..1302045
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AA seq
663 aa
AA seq
DB search
MSSQAPQVLSRRANGGPQTSSNQTSEPTKGKGSHENSSHGKARGRGSNARSTEANKHANE
SETPKPTKTKAHNEGEKLVIRRLPPGMTQAEFVSILGSEWELGKGKVDWFSFAGGKISTD
PSKPSRPGRAYVHVMKKDDILPLSDAVRTAVWEDAKASFNSPSLIGPPSVEFAIYKKVPS
NKKRTDARQGTIDQDPEFMAFLEELANPAPPKETVEGEEGDDLGKVETKVTTTPLIEYLK
EKKANKAKESSSSKNSKHGQDSRSAKGKNSSKDEDSGKKKGKESKAEKGEKTPKETVKIL
TKKATSEPNAETSKTNAKSQPNDSSAQETAPKSRRAGILAAARILQRDLGLSPGSAHRKA
RQDAAKAEADAKTPEKESTSTAEAKASASESPSTPVKSAEAEAPEPKGRGAANANKQQQS
NRRTRGGKNAEKSNQKEKGKDNSKEKEKVKESTSSQPAPNPPIVLLKKKATDAESNPPAK
PANTTTQAPAAQGGRSKADNAAGGSKGGPNKGSNAQKKPPTVSPDATRGFVKHANPSQGV
TEALLKQTLSAFGTITFVEIDKRKGFAYVDFAEHEGLVKAVTASPIPVAQGTVQVLERKD
KKPASTNANAATTAPAPVAGSAAPEKASGRGRRGRGGGNKVKDSGPNNQGTAPPPPAPAN
AGG
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcaagcaccacaagtcctgtctcgacgggcaaacggaggtcctcagacatca
tcaaatcagacctcagaaccaacaaagggaaaggggtcacacgagaacagttctcatgga
aaagctagagggagaggctctaatgcaagatctactgaggccaataagcatgcgaatgaa
agcgaaactccaaaacccaccaaaaccaaggctcataatgagggtgaaaagctcgtgata
cgtcgtctacctcctggaatgacccaggcagaatttgtatcaattcttggaagtgagtgg
gagttgggtaagggcaaggttgactggttttccttcgctggaggaaagatttccacagac
ccctcgaaaccttctcggcctggtcgcgcctacgttcatgttatgaaaaaggatgatatc
ttgcctctgagcgatgctgtgcgaaccgctgtctgggaggatgcgaaggcatcttttaat
agcccttctttgattggtcctccttcagttgagtttgccatttacaagaaggtcccaagc
aataagaagcgcaccgatgctcgacagggaacaatcgatcaggatcctgaattcatggct
ttcttggaggaactagcgaacccagcaccgccaaaagaaaccgtcgaaggagaagagggc
gacgaccttggtaaggtggagactaaagtcaccactacgccactcatcgagtacctcaag
gagaagaaggcaaacaaagccaaggagagctcatcctctaaaaattccaaacatggacag
gattctaggagcgctaaggggaagaactcgtccaaggacgaagactcgggtaagaagaag
ggcaaagagtccaaggccgaaaaaggcgaaaagacccctaaggaaaccgtcaagatcctc
accaagaaggcgacttctgagccgaatgcggagacctcgaagaccaatgctaaaagccag
cccaatgactccagcgcccaggaaactgcacccaagagccgacgtgcgggaattttggct
gcagcaaggatccttcagcgagatcttggtctcagtcccggaagtgcgcatagaaaggca
cgtcaagacgctgccaaagcagaagcagatgcaaagacaccagaaaaggagagcacatct
actgccgaagcaaaggccagtgcttccgaaagcccatctacgcctgtaaaatcagccgag
gccgaagcaccagaaccgaagggacgaggtgctgcaaatgccaacaaacagcagcaatca
aaccgcagaactcgaggcggaaagaacgctgagaagagcaatcaaaaggagaagggcaag
gataacagcaaagagaaggagaaagttaaggagagcacatcgagtcaaccagctcccaac
cctccaattgtgctccttaagaaaaaggctactgatgctgaatccaacccaccggcgaag
ccagcgaataccacaacgcaagcaccggccgcacagggagggagatcgaaagcagacaat
gcagccggtggctccaaaggcggacccaataaagggtctaatgcccagaagaaacccccg
actgtttctcctgacgctactcgtggctttgtcaagcatgccaacccctctcaaggtgtt
actgaggcgttacttaaacaaacgctctcagcttttgggacaattacctttgttgaaatt
gacaagcgcaaggggtttgcttatgttgactttgctgaacacgagggtcttgtgaaggct
gttacagccagtcctatccctgttgcacagggcactgtgcaagttttggagcgcaaggac
aagaagcctgccagcacgaatgcaaacgcggcgacgacagcaccagccccagttgctgga
tctgctgcgccggaaaaggcatctggtcgtggtcgacgtggacgaggtggaggtaataag
gtaaaggattctggtcctaataatcaagggactgctcctcctcctccagctccagccaac
gctggcggctga
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