Fusarium oxysporum: FOXG_11335
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Entry
FOXG_11335 CDS
T04882
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
fox
Fusarium oxysporum
Pathway
fox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOXG_11335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fox03019
]
FOXG_11335
03041 Spliceosome [BR:
fox03041
]
FOXG_11335
03032 DNA replication proteins [BR:
fox03032
]
FOXG_11335
Messenger RNA biogenesis [BR:
fox03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
FOXG_11335
Spliceosome [BR:
fox03041
]
Complex A
U1 snRNP components
Sm proteins
FOXG_11335
U2 snRNP components
FOXG_11335
Complex B
U1 snRNP components
FOXG_11335
U4/U6.U5 tri-snRNP components
FOXG_11335
Complex C
U2 snRNP components
FOXG_11335
DNA replication proteins [BR:
fox03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
FOXG_11335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
ADH_N_2
Motif
Other DBs
NCBI-GeneID:
28952745
NCBI-ProteinID:
XP_018249489
UniProt:
A0A0J9VJP5
LinkDB
All DBs
Position
1:1591801..1592651
Genome browser
AA seq
89 aa
AA seq
DB search
MSFVHLNPRPMLEKLVGNPVLVRLKWGEVEYKGTLVSIDSYMNIQLSGTEEYIEDKPTGS
LGQVLIRCNNVLWVRGADAGSDADAAMTG
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgtccaccttaatcctcgccccatgctggagaagcttgtcgggaacccagtt
cttgtccgtctaaaatggggcgaggttgagtacaagggaacgctggtttccatcgacagc
tacatgaacattcagctttccggcaccgaagagtacatcgaagacaagcctactggatca
ctgggccaagtattgattaggtgcaataatgtgttgtgggtgcgcggtgcagatgcagga
agcgacgctgatgccgctatgaccggttaa
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