Fusarium oxysporum: FOXG_12793
Help
Entry
FOXG_12793 CDS
T04882
Name
(RefSeq) transcription initiation factor TFIIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
fox
Fusarium oxysporum
Pathway
fox03022
Basal transcription factors
fox03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FOXG_12793
09124 Replication and repair
03420 Nucleotide excision repair
FOXG_12793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fox03021
]
FOXG_12793
03400 DNA repair and recombination proteins [BR:
fox03400
]
FOXG_12793
Transcription machinery [BR:
fox03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FOXG_12793
DNA repair and recombination proteins [BR:
fox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FOXG_12793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Rogdi_lz
TackOD1
Motif
Other DBs
NCBI-GeneID:
28954092
NCBI-ProteinID:
XP_018251239
UniProt:
A0A0J9VQE4
LinkDB
All DBs
Position
9:complement(2487799..2489478)
Genome browser
AA seq
358 aa
AA seq
DB search
MDAVDVSEHYEVGTREETPSLLTIVLDTNPRAWASLNNALPLSRAIANILVFVNAHLAFS
NANQVALIAAHVDRAEWLYPTPPKPSRDASGDVAMNDASQTQTQTSANKFPQFAQIEAAV
LAAIRKLMDQTKEEDLSATTTQISGALTLALCHINKAAQALCAPTANLEDSHKGSSNTAP
PTVRGRILVISVSDSEPSQYIPTMNAVFAAGHTQVAIDTLSLTGEPTFLQQACYNTGGTY
LAATHPQGLLNYLMFGLIADTEAREALIAPTHDTVDFRAACFCHGRVVDTGFVCSICLSI
FCETPENSECFTCGTKLSLGNYGAKPAVVPRKKKKKRKIVNGGGSREETGSATGTPRP
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcgatgtttcagagcactacgaggtcggcacccgcgaagaaactccctcc
ctcctcaccatcgtcctcgacacgaaccctcgagcctgggcatcgctcaacaatgctctg
cccttatcgcgtgccattgcaaacattctcgttttcgtcaacgcccatctcgctttcagc
aacgcaaaccaagttgctcttatcgccgcccacgttgatcgcgcagaatggctctaccca
acacctcccaaaccctcacgcgacgcctctggcgatgttgccatgaatgatgcttcgcaa
acgcaaacacaaacctcggcaaacaagtttccacagtttgcacagattgaagctgctgtt
ttggctgcgattcgaaaactcatggatcagacaaaggaggaggacctctctgcgacgacg
acacaaatctctggggccttgacactggcgctatgtcacatcaataaagctgcgcaggct
ctttgtgcgcctacggccaatctcgaggacagccacaaaggctcgtcgaatacagccccc
ccaactgttcgaggtcgaatcctagtcatttctgtgtccgattcagaaccctcgcaatac
attcctaccatgaacgctgtcttcgcagctggccatacccaagtcgccatcgatactctc
tctcttactggcgagccaactttcctacaacaggcttgctacaacaccggtggcacatac
ctcgctgctacacatccccaaggactactgaactacctcatgttcggtcttatcgcggac
acagaagctcgtgaagctctaattgccccaacacacgacaccgttgatttccgcgccgcc
tgtttctgtcacggccgagttgtggacacaggcttcgtctgctcaatctgcctgagcatc
ttctgtgagacgccagagaactcggagtgtttcacgtgtggcaccaaactatctctgggt
aactatggagcgaagcccgctgttgtaccaaggaagaagaaaaagaagcgcaagatcgtc
aatggaggcggttcacgggaagagacagggagtgcgacagggacaccccgcccttga
DBGET
integrated database retrieval system
