Fusarium oxysporum: FOXG_12832
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Entry
FOXG_12832 CDS
T04882
Name
(RefSeq) ATP-dependent rRNA helicase SPB4
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
fox
Fusarium oxysporum
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fox03009
]
FOXG_12832
Enzymes [BR:
fox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FOXG_12832
Ribosome biogenesis [BR:
fox03009
]
Eukaryotic type
Pre-60S particles
Helicases
FOXG_12832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
28954131
NCBI-ProteinID:
XP_018251313
UniProt:
A0A0J9VQT4
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All DBs
Position
9:complement(2623533..2625752)
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AA seq
635 aa
AA seq
DB search
MASEKVKKRSPRAWDALTPPLAEWIRDAVATMGFSQMTPVQAATLPHFLGNKDVVVEAVT
GSGKTLAFLIPLVQKLLRLSEPTKKHHVAAIIVSPTRELAAQIHTVLVNLLQFHEASAEI
LPHLKGDEKRPSTTVPAIVPQLLVGGTTTTAQDLSFFLRHSPNVLISSPGRLVELLSSPH
VHCPQSSFEVLVLDEADRLLDLGFKPDLQKILSHLPKQRRTGLFSASVSEAVGEIIRVGL
RNPVKIEVKVKMKDGGILEDRKTPASLQMAYMVKPASQKLPALAELLRQLPIKPQRSIVF
LSTCAAVDYFQHVLPAILPEGFALVPLHGKHPAKVREKNFNRFLNSVAPTILLTTDLAAR
GLDIPQVDLVVQIDAPSDPKAFIHRSGRAGRAGRKGLAVVMLHPGREEDYVQFLEIRKTP
ISKLEKPTVFTSEEDAVAATKKMRDLVLTDRALFDKAQKGFVSWARSYGAHQATSIFRAA
DLDWADLGNAWGLLRMPRMPELKSWKGDKMCGLEIDWDNYAYKEKTREQARKAALEEERS
GEKKDKSDETKRKRKNNEAWSAKHEKEDERVERREKRRKRREAEATSKMTDEEKFKQMEL
NELIAEVRRQNREKAAAEAAAAKKDKEDEFAGFDD
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagaaaaggtcaaaaagagaagcccgagagcttgggatgctcttactcctcct
cttgcagaatggattcgcgatgcggtcgcaactatgggcttcagccaaatgacacccgtc
caagctgcaacactaccacatttcctcggaaacaaagatgttgttgttgaggctgtcact
ggcagtggaaaaaccctcgcctttctcatccctcttgtacaaaaacttttgcgacttagc
gaacccacgaagaagcatcatgttgctgcgataatcgtctctcccacgcgcgaattggcc
gctcaaattcatactgttctcgtcaatctgttacaattccacgaagcttcggctgaaatc
ctcccacacctcaaaggcgacgaaaaacgaccttctactaccgtgcccgccatcgtaccc
cagctgctcgttggaggtacaacgaccaccgcgcaagatctcagtttcttccttcgacat
agcccaaatgttcttatctcctcgcccggccgacttgtcgaactcttgtcttcacctcac
gtccactgccctcaatcctcttttgaggttctcgtcctcgatgaagccgatcgacttctt
gaccttggctttaagcctgatctccagaaaattctatcacaccttccaaaacaaagaaga
actggtcttttcagcgccagtgttagtgaggctgttggagagattatccgagttggttta
cgaaatcccgtcaagatcgaggttaaggtcaagatgaaggatggaggaattcttgaagac
agaaaaacacctgccagtctccaaatggcatatatggtcaagcctgctagccaaaagctg
cctgccttggcagaacttcttcgacaattacctataaaaccccaacgaagcattgtcttc
ctctccacatgcgccgcggtcgattactttcaacacgttctacctgcgatcctaccagaa
ggttttgcgttggtgcctcttcacgggaagcacccagctaaagtacgagagaagaacttc
aaccgctttttgaactctgttgcccccacaatactacttacaacagacttggcagctcgt
ggattggatattcctcaggttgacttggtggttcagatcgacgctccttcagatcccaag
gcgtttatccaccgtagtggaagagctggtcgtgcaggccgaaagggtttggcggtggtt
atgttgcaccccgggcgagaggaggactacgttcagtttctggagattcgcaaaacaccg
atttccaagcttgagaagccaactgtttttacatcagaggaggatgccgtggctgctaca
aagaagatgagggatctggtgttgacggatagagcacttttcgacaaggctcagaaggga
tttgtgagttgggctcgaagctatggcgcccatcaggcaacatctatcttccgcgcagct
gatctcgactgggctgatcttggtaatgcatggggactgcttcgcatgcccaggatgcct
gagctcaagagctggaagggcgacaagatgtgtggtctcgaaattgactgggacaattac
gcctacaaggagaagacacgcgagcaagcacgaaaagcagctctcgaagaggaaaggtct
ggagagaagaaggataagagcgacgagacaaagcgaaagcgaaagaacaacgaagcatgg
agcgctaagcacgaaaaggaggatgagagagttgagcgcagggagaagcgacgtaagcgc
cgtgaggctgaggctacgtctaagatgacggacgaagagaagttcaagcagatggagcta
aacgaactcatcgccgaggtccggagacagaaccgcgaaaaggctgctgctgaagctgcg
gcggctaagaaggataaggaggatgagtttgcgggcttcgatgattag
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