KEGG   Fusarium oxysporum: FOXG_13846
Entry
FOXG_13846        CDS       T04882                                 
Name
(RefSeq) hypothetical protein
  KO
K14400  pre-mRNA cleavage complex 2 protein Pcf11
Organism
fox  Fusarium oxysporum
Pathway
fox03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:fox00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    FOXG_13846
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fox03021]
    FOXG_13846
   03019 Messenger RNA biogenesis [BR:fox03019]
    FOXG_13846
Transcription machinery [BR:fox03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     FOXG_13846
Messenger RNA biogenesis [BR:fox03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     FOXG_13846
SSDB
Motif
Pfam: CID VHS Pfc11_Clp1_ID
Other DBs
NCBI-GeneID: 28955076
NCBI-ProteinID: XP_018253227
UniProt: A0A0J9WT03
LinkDB
Position
10:complement(774203..776219)
AA seq 487 aa
MSGDSAEVAEDYRMALEDLSSNMRFEISNLTVIARENTEHALAIAEVLQQHILKAPPNKK
LPALYVLDSIVKNVGTPYTLYFGRTLFKTFMESYAVVDQPVRRKMEEMLRTWKEPVPGSM
DSRPVFTHELVRPIENALLKARAVSMPQAGMMPGRPRSGVPHRDTPTPPGTRYPPGHPAQ
QYTSNGGQSLSNDIRNLIVATQAEALRNPQNVDVQTRLRALHELQGVVNSTSLPPDQLEL
IKRRVTELAAVNMMAPLTQRPAPTPPVPVQARPMPPVSVALPPSAAPAPAQEGVTLDALF
GPGALAALMARKSATPSSSTPTPQPPQVRPEPPKPPMSNMSAMPAVAPMPAMSIPTIPGM
TPMPTMSQTPTPAPAANAAPWSLLDQLRKSGLLPPAPTATPTPVPVQGGINVAALKQPCQ
PSLIRALHNDLGQPCTQCGRRFRDDPVGKKQKIAHMDWHFRVHQRTNEAEKRGMHRSWYV
DQRDSCV
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgtccggagactctgctgaggtggcggaggattaccgcatggccttggaggatctatcc
tccaacatgcgcttcgagattagcaacctgacagtcattgctcgtgagaatactgaacat
gccctagctatcgccgaagttttgcaacaacacatcctcaaggcgccaccgaacaagaaa
cttccagctctgtatgtactcgactcgatcgtgaaaaatgtcggcacaccatacactctt
tacttcggccgcactctgttcaagacctttatggaatcttatgcagtagtcgatcaacca
gttcgtcgaaaaatggaggagatgcttagaacatggaaggagcctgttcctgggtcaatg
gacagcaggcccgtctttacgcacgagttggtgcgtcctattgagaatgcactcttgaag
gcacgcgccgtaagcatgccccaagcgggaatgatgcctgggcgaccgcgctctggcgtg
cctcatcgtgatactccgacaccgcctgggacgagataccctccaggccatccagcccag
caatacacttcaaatgggggacagtcattgagcaatgacattcggaatctaattgttgcc
acgcaggcggaagccttgcgcaatccccaaaatgttgatgttcagactagattaagagca
cttcatgagctgcagggcgttgtgaacagcactagcttgcctccggatcagcttgagctc
attaagagacgagtaactgaacttgctgccgtaaacatgatggcgcctctgactcaaagg
cctgcacctactcctcctgtgcccgttcaagcacgccctatgcctccagtgtccgtagcc
cttcctccgtctgcagctccggctccggcacaagaaggtgtgacgcttgatgcgctcttt
ggcccgggagccttggccgccttgatggcaagaaagtcggctacaccttcgagctcaaca
ccaacccctcagcctcctcaggttcgtcctgaaccgccaaagccacctatgtcaaacatg
tctgcaatgccggccgtggctcctatgccagcaatgtcgatacctacgatacctggaatg
actccaatgcctacgatgtcccagacaccaacaccagcgccggcagcaaacgcagcccct
tggagtcttcttgatcagctacggaaatcaggcctactccctcctgcgcctacagcaaca
cccacgccagttccagtacaaggcggtatcaatgtggccgctctcaaacagccctgtcag
ccttctttgatcagggcgctacataacgacctgggccaaccttgtacccagtgtggtaga
cggtttcgagacgatccagttggaaagaagcagaagattgctcatatggactggcatttc
cgtgtccaccagcgaaccaacgaagccgagaagcgaggtatgcaccggagttggtacgtt
gatcaacgcgattcttgtgtttga

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