Fusarium oxysporum: FOXG_13846
Help
Entry
FOXG_13846 CDS
T04882
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
fox
Fusarium oxysporum
Pathway
fox03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
FOXG_13846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fox03021
]
FOXG_13846
03019 Messenger RNA biogenesis [BR:
fox03019
]
FOXG_13846
Transcription machinery [BR:
fox03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
FOXG_13846
Messenger RNA biogenesis [BR:
fox03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
FOXG_13846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
VHS
Pfc11_Clp1_ID
Motif
Other DBs
NCBI-GeneID:
28955076
NCBI-ProteinID:
XP_018253227
UniProt:
A0A0J9WT03
LinkDB
All DBs
Position
10:complement(774203..776219)
Genome browser
AA seq
487 aa
AA seq
DB search
MSGDSAEVAEDYRMALEDLSSNMRFEISNLTVIARENTEHALAIAEVLQQHILKAPPNKK
LPALYVLDSIVKNVGTPYTLYFGRTLFKTFMESYAVVDQPVRRKMEEMLRTWKEPVPGSM
DSRPVFTHELVRPIENALLKARAVSMPQAGMMPGRPRSGVPHRDTPTPPGTRYPPGHPAQ
QYTSNGGQSLSNDIRNLIVATQAEALRNPQNVDVQTRLRALHELQGVVNSTSLPPDQLEL
IKRRVTELAAVNMMAPLTQRPAPTPPVPVQARPMPPVSVALPPSAAPAPAQEGVTLDALF
GPGALAALMARKSATPSSSTPTPQPPQVRPEPPKPPMSNMSAMPAVAPMPAMSIPTIPGM
TPMPTMSQTPTPAPAANAAPWSLLDQLRKSGLLPPAPTATPTPVPVQGGINVAALKQPCQ
PSLIRALHNDLGQPCTQCGRRFRDDPVGKKQKIAHMDWHFRVHQRTNEAEKRGMHRSWYV
DQRDSCV
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagactctgctgaggtggcggaggattaccgcatggccttggaggatctatcc
tccaacatgcgcttcgagattagcaacctgacagtcattgctcgtgagaatactgaacat
gccctagctatcgccgaagttttgcaacaacacatcctcaaggcgccaccgaacaagaaa
cttccagctctgtatgtactcgactcgatcgtgaaaaatgtcggcacaccatacactctt
tacttcggccgcactctgttcaagacctttatggaatcttatgcagtagtcgatcaacca
gttcgtcgaaaaatggaggagatgcttagaacatggaaggagcctgttcctgggtcaatg
gacagcaggcccgtctttacgcacgagttggtgcgtcctattgagaatgcactcttgaag
gcacgcgccgtaagcatgccccaagcgggaatgatgcctgggcgaccgcgctctggcgtg
cctcatcgtgatactccgacaccgcctgggacgagataccctccaggccatccagcccag
caatacacttcaaatgggggacagtcattgagcaatgacattcggaatctaattgttgcc
acgcaggcggaagccttgcgcaatccccaaaatgttgatgttcagactagattaagagca
cttcatgagctgcagggcgttgtgaacagcactagcttgcctccggatcagcttgagctc
attaagagacgagtaactgaacttgctgccgtaaacatgatggcgcctctgactcaaagg
cctgcacctactcctcctgtgcccgttcaagcacgccctatgcctccagtgtccgtagcc
cttcctccgtctgcagctccggctccggcacaagaaggtgtgacgcttgatgcgctcttt
ggcccgggagccttggccgccttgatggcaagaaagtcggctacaccttcgagctcaaca
ccaacccctcagcctcctcaggttcgtcctgaaccgccaaagccacctatgtcaaacatg
tctgcaatgccggccgtggctcctatgccagcaatgtcgatacctacgatacctggaatg
actccaatgcctacgatgtcccagacaccaacaccagcgccggcagcaaacgcagcccct
tggagtcttcttgatcagctacggaaatcaggcctactccctcctgcgcctacagcaaca
cccacgccagttccagtacaaggcggtatcaatgtggccgctctcaaacagccctgtcag
ccttctttgatcagggcgctacataacgacctgggccaaccttgtacccagtgtggtaga
cggtttcgagacgatccagttggaaagaagcagaagattgctcatatggactggcatttc
cgtgtccaccagcgaaccaacgaagccgagaagcgaggtatgcaccggagttggtacgtt
gatcaacgcgattcttgtgtttga
DBGET
integrated database retrieval system