Fusarium oxysporum: FOXG_13931
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Entry
FOXG_13931 CDS
T04882
Name
(RefSeq) transcription initiation factor TFIIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
fox
Fusarium oxysporum
Pathway
fox03022
Basal transcription factors
fox03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FOXG_13931
09124 Replication and repair
03420 Nucleotide excision repair
FOXG_13931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fox03021
]
FOXG_13931
03400 DNA repair and recombination proteins [BR:
fox03400
]
FOXG_13931
Transcription machinery [BR:
fox03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FOXG_13931
DNA repair and recombination proteins [BR:
fox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FOXG_13931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
28955155
NCBI-ProteinID:
XP_018253380
UniProt:
A0A0J9VX63
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Position
10:complement(1056686..1059635)
Genome browser
AA seq
649 aa
AA seq
DB search
MAIPVGRTLFKKKEGILTLTSDHQLVTWTPNSGGPATVSLNINNITNLQQTPDSSPKVML
KIFEKVGDAEPATYLFHFNTAEAKDEAKAVKDLLSSLLASTRGNDASVPKPSGASGGSST
PNPGAGSGTGGGSGSASMAFASAVNSQNASSSRWFDDSQLKNDIELQQSLMRKDTSLHQT
YVEAMQTKPDSLSGAAFNSQFWSTRTNLLRAHAIEINQKKGAYNVLSTVKPKTVDGELKL
NISVEQVQMIFAQHPLIKRVYNENVPKLSEADFWSRFFLSRLSKKLRGERVAENDPNDPL
FDKYDPAENTVAFQSKIMANQVPHFIDIEANEENQGGFKSGNAKDVEMRPRANIPIVKTL
NSLSEKIMANVAPSDVNTDDPDGGYNAYVQLALRDLKGDAKEHRIMLNVKEQNKFFSKHD
SAPSKQAAVFEKQVPSEVLFEIVGDLETLESDGAGGINIQAAMGFDEESESDEDTPKRPH
VGSRSALLAADKDIMKGVRQQRAQKYGHETDAVEPMGLPVEISRKCSLTHATTIEFLHQF
WNAFLSGDPDRAGELQYLAESLGRSLARINAVAEEADKEREEIIRSRKKEIRDHFQRTGK
KIRWRSDNVGGGKAAVIALMQPTMNALEKAQADYSRALAAEGIQISTEA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcccagtgggacgtacccttttcaaaaagaaggagggcattctgactctcaca
agtgaccatcagctggtcacttggactcctaattcaggaggccctgccacagtctcacta
aacatcaataacatcacaaacctccaacagaccccagattcttcaccaaaggttatgctc
aaaatctttgaaaaggttggagacgcagagcctgctacatatctctttcacttcaacacc
gccgaggccaaggatgaggcaaaggctgtcaaagatctattatccagcctattagcttct
acgcgcggcaacgatgcttctgttccaaaaccatccggcgcaagtggtggctcttcaacg
cccaatccaggcgctggtagtggcactggtggtggtagcggttccgcgtccatggccttc
gccagcgctgtcaactcacagaatgcttcatcctcgcgctggttcgatgactcgcagctc
aagaacgacatcgagttgcaacagtcactgatgagaaaagatacaagtctgcatcaaaca
tacgttgaagcaatgcaaaccaagcccgactccttatcaggagccgcctttaattcacag
ttctggtcaacccggacaaatcttctccgagcccatgctattgagataaaccagaagaaa
ggagcatataatgtcctctcaaccgtcaaacccaagactgttgatggcgaactaaaacta
aacatcagcgtagagcaggtgcaaatgatattcgcacaacatcctctgatcaaacgtgta
tacaacgagaatgtccccaagctatctgaagcggacttctggtcccgtttcttcctcagc
agactttccaaaaagctacgcggtgagcgagtcgccgagaacgaccctaatgaccctttg
ttcgacaaatatgaccctgctgagaatacggttgcctttcagagcaaaatcatggcaaac
caagtaccgcattttatcgacatcgaggccaacgaagagaatcaaggaggcttcaaaagt
ggaaacgcgaaggatgtcgagatgcgtcctagggccaatataccaattgtgaagaccctc
aacagtctcagtgagaagatcatggccaacgttgcgccttctgatgtcaacactgatgat
cccgatggtggttacaacgcatatgtccagctggctttgcgtgatctgaagggcgacgcg
aaggagcatcgtattatgctcaacgtgaaggaacagaacaagttcttttcaaaacatgac
tctgcgccctcgaaacaagctgcggttttcgaaaaacaggttcctagcgaagttctgttc
gagatagtgggagatctcgagactcttgagagcgatggtgctggcggaataaatatacag
gcagcaatgggatttgatgaagagagcgaaagtgacgaagatactcccaaacggccgcat
gttggatcacgctccgctctcttagctgctgacaaggacatcatgaagggtgtgcgccag
caacgcgctcaaaaatacggccacgagacggatgccgttgagcccatggggctccctgtt
gagatctcccgcaagtgcagtcttacccacgcaacgaccatcgagtttctgcatcagttc
tggaacgcattcctctcgggcgacccggaccgcgctggtgagctacagtacctagccgag
tctctcggccggtcactggcacgtatcaacgccgttgcagaggaagccgacaaggaacgg
gaggaaatcattcgcagccggaagaaagagatccgcgatcatttccagcgaaccggtaag
aagatcagatggcgatcagataatgttggaggtggcaaagctgccgtgattgctttgatg
caaccaactatgaatgctttggagaaggctcaagccgactactcgagggctctcgcagca
gaggggatacagatatcgactgaagcatga
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