Fusarium oxysporum: FOXG_19081
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Entry
FOXG_19081 CDS
T04882
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
fox
Fusarium oxysporum
Pathway
fox03013
Nucleocytoplasmic transport
fox03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FOXG_19081
03015 mRNA surveillance pathway
FOXG_19081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fox03019
]
FOXG_19081
Enzymes [BR:
fox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FOXG_19081
Messenger RNA biogenesis [BR:
fox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
FOXG_19081
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Nop5_56-rel_N_Arc
Motif
Other DBs
NCBI-GeneID:
28959787
NCBI-ProteinID:
XP_018241043
LinkDB
All DBs
Position
2:complement(153280..156104)
Genome browser
AA seq
769 aa
AA seq
DB search
MPLRQLYPDPKSAPGHAPPAKIDIIAVHGLGSPAKGETKHAFDTWRTPSGQKGRLWLQQD
LPAHIPDSRIFLYQYDATPTYGRGLGDFRSKADNLLEVISNERGDDLERPIFLLGHNLGG
LLIKQALINAHSNPGYIAIKDATAALVFFGTPQDTVAQKLGETAVLIAKDFGLRAEDDVV
KSLQTATIFSELESWKHQVLEYDIVSFWGSSDTVVSRECASLGLPGDIAKIVELNASHRE
LCKFGTTDRDQYNLKIVVANIKRLYKIAIEKFDSQGVWFPDTSGVETPRTSEEYGQDDLD
DGVEGTQSVTTSTTDATRQPVFTPSQGSQLQADERTARNSLIKDFDHPNVEEASGFIGSA
LEDLHIADIQEAQGNLYSRTPFTNLSLPEPVLRGVRYLNYQWPTKVQESVLSAFTSYPPR
NVIANYPPGTGRTTALAIALLSRIDYSSTTQPQALVIVPTRLLVRQTENYINEIGRSCDG
LVVETVTSSNKPTAKLEANVIVATPGRLFDYIRRRLVDTSQVRFFLVDDVDYVVDFSALR
QLCIRVARKSPKTTQFLFLSDLSMRASDFVNDMLRSNTWEKHEVKAVELNANKIVHLLFR
CSGEQEKLDIICKLPGVVQISMLIIFVQMRSSAHQIQRVLAEEGHAITNLFKATDDSGME
ELLEKFEAGQAKVLITKDYKTRGLDLPSSSMVINYDIPDADLYRYIRQVSRAGKAGRSGF
AVNLVSDETELDALRSVAASGCFNLHELDSNDWDAAEQFLRNCTRSQRF
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgccacttcggcaactatacccagacccaaagtcggccccaggtcatgctcctcctgct
aagatagacattatcgccgttcatggcctgggttctcccgcaaagggtgagacgaaacac
gcattcgacacgtggagaactccatcaggtcagaagggacgtctatggcttcagcaagat
ctcccagcacatattcctgactctcgtatctttctataccaatatgatgcaacgcctacg
tatggccgaggtcttggcgattttcgcagcaaggccgataatcttcttgaagtcataagc
aatgagagaggagatgatcttgaaaggccaatctttctactcggtcataacttggggggc
ttgttgatcaagcaagctcttatcaacgcccatagcaacccaggctacatcgccattaag
gacgctaccgccgccctcgtattctttggaacaccacaagataccgttgctcagaaactt
ggtgaaacggcggtattgattgccaaagactttgggcttagagcagaagatgatgttgtc
aaatctctgcagactgctaccatcttctctgaactcgaatcatggaaacatcaagtactt
gagtacgacattgtctccttttgggggtcatctgataccgtggtctcccgtgagtgcgct
agtcttgggctgcccggtgatattgcgaagatagtagaactcaacgctagtcacagagaa
ctttgcaagttcggcactactgacagagaccagtacaacttgaagatcgtggttgcgaat
attaagcgtctctacaaaatagcgatcgaaaagtttgattcgcaaggtgtttggttccca
gatacgtctggtgtcgaaacgccccgcacttcagaggaatatggccaggacgatcttgat
gacggcgtggaagggacacagagtgtcacgacaagtacaactgatgcgacaagacaaccg
gtgtttacgccgagccagggaagccaacttcaagctgacgaaagaactgctcgaaactct
ctgattaaagatttcgaccaccctaatgtagaagaagcctcgggcttcataggctcggct
ttggaggacctccacatcgcagacatccaggaggctcaaggtaatctttattcccggacg
ccttttacaaatctcagcctgccagagcctgttttacgaggtgtcagatatctcaattat
caatggcccaccaaggtgcaagaatcagtactttctgccttcacatcgtatcctcctcgt
aacgtaatcgcgaattaccctccaggaactggcagaaccacagcactggcaattgctctc
ctgtcgcgcatagactacagttcgaccactcagccccaagcattggtgatagtaccaact
cgattactggtacgccagacggagaactatatcaatgagataggcagatcctgcgatggt
cttgttgtggagaccgtcacttcgtcaaacaagccaaccgcaaagcttgaggcaaacgtt
attgttgctacacccggtaggcttttcgactacattcgtcgtcgtctggtcgacacatct
caggtgaggttctttctcgtggacgacgtcgattatgttgtggatttttcagcattgaga
cagctttgcattcgagtcgccagaaagtcgccgaaaaccactcaatttctattcctttcc
gatctatcaatgcgggcctcagattttgtaaatgatatgctccggtccaatacttgggag
aagcatgaggtgaaggcggtagaactgaatgccaacaagatcgttcacctgttattcaga
tgtagcggggagcaggagaagcttgacattatttgcaagcttcctggtgtcgtgcagata
agtatgttgatcatatttgtccagatgaggtcttctgcgcatcagatacagcgtgtacta
gcagaagaaggccacgccataacgaacttgttcaaggcaactgatgacagcgggatggaa
gagctattggagaagttcgaggctggacaagccaaggttctcattacaaaagactacaag
acccggggccttgatcttccctctagctccatggtcattaactatgatataccggatgcc
gacctataccggtacattcgtcaagtcagtcgcgcaggcaaagccgggcgttctggtttc
gccgtgaatctggtaagtgacgagacggaattagatgctcttcggtcagtcgcagcatct
ggatgcttcaatcttcatgagcttgactcgaacgactgggacgcagctgagcagttcttg
agaaactgcactagatctcaaagattctaa
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