KEGG   Fusarium oxysporum: FOXG_20775
Entry
FOXG_20775        CDS       T04882                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
fox  Fusarium oxysporum
Pathway
fox03013  Nucleocytoplasmic transport
fox03015  mRNA surveillance pathway
fox03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fox00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FOXG_20775
  09122 Translation
   03013 Nucleocytoplasmic transport
    FOXG_20775
   03015 mRNA surveillance pathway
    FOXG_20775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fox03019]
    FOXG_20775
   03041 Spliceosome [BR:fox03041]
    FOXG_20775
Messenger RNA biogenesis [BR:fox03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     FOXG_20775
    TREX complex
     FOXG_20775
Spliceosome [BR:fox03041]
 Complex C
  Other components
   EJC/TREX
    FOXG_20775
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    FOXG_20775
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded RRM_PARP14_3 RRM_3 Peptidase_M35
Other DBs
NCBI-GeneID: 28961481
NCBI-ProteinID: XP_018251181
UniProt: A0A0J9VQP6
LinkDB
Position
9:2380769..2383320
AA seq 251 aa
MSGKLDQALDDITQAQRRSARRRPNQRRGAGRPAAAAPVGGIQKSTKPARGAGAKPAPAK
ATPTNSDSKIIVSNLPKDVSEQQIKEYFIQSVGPIKRVELSYGPNSQSRGIANVTFHKSD
GASKAFQKLNGLLVDNRPIKIEIVVGAAQADKVIPTVKTLAERTTQPKAQPKSAAADKHN
AGAAKGAAAKGAAGKKRRGRNSRPAKKTQEELDSEMADYFDASAAPEASNNAAAPAPAPA
ATGDADMDEIA
NT seq 756 nt   +upstreamnt  +downstreamnt
atgtccggcaagctcgaccaagctctcgacgatatcacccaggcccagcgccgtagcgct
cgccgccgacccaaccagcgccgcggtgccggacgccctgctgcggccgcacccgttggt
ggtatccagaagagtaccaagcccgcacgcggtgccggcgcaaagcctgccccagccaag
gctactcctaccaacagtgatagcaagatcattgtgagcaatctgcctaaggacgtctcg
gagcagcagattaaggagtactttatccaatccgttggccccatcaagcgagttgagctc
tcctacggccctaactctcaaagccgcggtatcgcaaacgtgaccttccacaagtcggat
ggcgctagcaaggccttccagaaactgaacggccttcttgttgacaaccgacctatcaag
atcgagatcgttgtcggagctgcccaggctgataaggtcattcctaccgtcaagacgctt
gctgagcgcaccacccaacctaaggctcaacccaagtccgctgctgctgacaagcacaac
gccggtgccgccaagggcgccgctgccaagggagctgctggcaagaagcgccgtggtcgc
aacagccgtcccgcgaagaagacccaggaggaactcgactcggagatggctgactacttt
gacgcctcggccgcccctgaggccagcaacaacgctgctgcgcctgcacccgcaccagct
gctactggtgatgctgacatggatgagatcgcttaa

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