Fusarium oxysporum: FOXG_20775
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Entry
FOXG_20775 CDS
T04882
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
fox
Fusarium oxysporum
Pathway
fox03013
Nucleocytoplasmic transport
fox03015
mRNA surveillance pathway
fox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOXG_20775
09122 Translation
03013 Nucleocytoplasmic transport
FOXG_20775
03015 mRNA surveillance pathway
FOXG_20775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fox03019
]
FOXG_20775
03041 Spliceosome [BR:
fox03041
]
FOXG_20775
Messenger RNA biogenesis [BR:
fox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
FOXG_20775
TREX complex
FOXG_20775
Spliceosome [BR:
fox03041
]
Complex C
Other components
EJC/TREX
FOXG_20775
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
FOXG_20775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
RRM_PARP14_3
RRM_3
Peptidase_M35
Motif
Other DBs
NCBI-GeneID:
28961481
NCBI-ProteinID:
XP_018251181
UniProt:
A0A0J9VQP6
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All DBs
Position
9:2380769..2383320
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AA seq
251 aa
AA seq
DB search
MSGKLDQALDDITQAQRRSARRRPNQRRGAGRPAAAAPVGGIQKSTKPARGAGAKPAPAK
ATPTNSDSKIIVSNLPKDVSEQQIKEYFIQSVGPIKRVELSYGPNSQSRGIANVTFHKSD
GASKAFQKLNGLLVDNRPIKIEIVVGAAQADKVIPTVKTLAERTTQPKAQPKSAAADKHN
AGAAKGAAAKGAAGKKRRGRNSRPAKKTQEELDSEMADYFDASAAPEASNNAAAPAPAPA
ATGDADMDEIA
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcaagctcgaccaagctctcgacgatatcacccaggcccagcgccgtagcgct
cgccgccgacccaaccagcgccgcggtgccggacgccctgctgcggccgcacccgttggt
ggtatccagaagagtaccaagcccgcacgcggtgccggcgcaaagcctgccccagccaag
gctactcctaccaacagtgatagcaagatcattgtgagcaatctgcctaaggacgtctcg
gagcagcagattaaggagtactttatccaatccgttggccccatcaagcgagttgagctc
tcctacggccctaactctcaaagccgcggtatcgcaaacgtgaccttccacaagtcggat
ggcgctagcaaggccttccagaaactgaacggccttcttgttgacaaccgacctatcaag
atcgagatcgttgtcggagctgcccaggctgataaggtcattcctaccgtcaagacgctt
gctgagcgcaccacccaacctaaggctcaacccaagtccgctgctgctgacaagcacaac
gccggtgccgccaagggcgccgctgccaagggagctgctggcaagaagcgccgtggtcgc
aacagccgtcccgcgaagaagacccaggaggaactcgactcggagatggctgactacttt
gacgcctcggccgcccctgaggccagcaacaacgctgctgcgcctgcacccgcaccagct
gctactggtgatgctgacatggatgagatcgcttaa
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