Faecalibacterium prausnitzii SL3/3: FPR_11760
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Entry
FPR_11760 CDS
T02592
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fpa
Faecalibacterium prausnitzii SL3/3
Pathway
fpa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fpa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FPR_11760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpa03021
]
FPR_11760
03400 DNA repair and recombination proteins [BR:
fpa03400
]
FPR_11760
Enzymes [BR:
fpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FPR_11760
Transcription machinery [BR:
fpa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FPR_11760
DNA repair and recombination proteins [BR:
fpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FPR_11760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
RAD51D_N
Endonuc-dimeris
PASTA
RnlA_toxin
Motif
Other DBs
NCBI-ProteinID:
CBL01494
UniProt:
D4K9I1
LinkDB
All DBs
Position
1189230..1190186
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AA seq
318 aa
AA seq
DB search
MMEIERPKIETASLSPDGRYGKFVAEPLERGFGITLGNSLRRVLLSSLPGVAVTSVKIDG
VVHEFSTIEGVKEDVTEIVLNLKGIAAKLYTDGPKTVRVEAVGPCEVTADNIKQGDDIEI
LNPEWHIATLGEGAKLVMELTFDKGRGYVPAERNKQAIIEKNDINTLPVDSIYTPVLKVN
YNVESTRVGQAIDYDKLTIEVWTDGTINAQEAVSLAARVLTEHLNLFVNLSDEAAGAEIM
VEKTNDDKEKALEMTIEELDLSVRSFNCLKRAGINTVEDLVSKSEDEMMKVRNLGRKSLE
EVMAKLDSLGFKLNTDDE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatggagattgaacgtcccaagatcgaaacggcaagcctgtccccggacggccgctac
ggcaaattcgtggcagaacctctggagcgtggctttggcatcacactgggcaatagcctg
cgtcgtgtgcttctttcctctctgcccggtgtcgccgtgaccagcgtcaagattgacggt
gtggtccacgagttctccaccattgagggcgtcaaggaagacgttaccgaaattgtcctg
aacctgaagggtatcgctgcaaagctgtacaccgatggtccgaagacagtgcgtgttgag
gcagttggtccctgtgaggtcactgctgacaacatcaagcagggcgacgacatcgaaatt
ctgaaccctgagtggcacattgcaactctgggtgagggtgccaagctcgttatggagctg
actttcgacaagggtcgcggctatgtgcccgcagagcgcaacaaacaggctatcatcgag
aagaacgatatcaacacccttcccgttgacagcatttacacccctgtgctcaaggtgaat
tataacgtcgagagcacccgtgttggacaggccattgattacgacaagctgaccattgag
gtttggaccgatggcacgatcaacgcacaggaagccgtttctctggctgcccgtgtgctg
accgagcacctgaacctgttcgtcaacctgtcggacgaggccgccggcgctgagatcatg
gtagagaagaccaacgacgacaaggagaaggctctggagatgaccatcgaagagctggat
ctgagcgtgcgttccttcaactgcctgaagcgcgcagggatcaacacggtggaagatctg
gtcagcaagagcgaggacgagatgatgaaggtccgtaacctcggtcgcaagagcttggag
gaagtcatggctaagctggactccctcggcttcaagctgaacacggatgacgaataa
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