Faecalibacterium prausnitzii SL3/3: FPR_27670
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Entry
FPR_27670 CDS
T02592
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fpa
Faecalibacterium prausnitzii SL3/3
Pathway
fpa03410
Base excision repair
fpa03430
Mismatch repair
fpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FPR_27670
03430 Mismatch repair
FPR_27670
03440 Homologous recombination
FPR_27670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpa03400
]
FPR_27670
DNA repair and recombination proteins [BR:
fpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FPR_27670
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FPR_27670
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FPR_27670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
RepB-RCR_reg
ArAE_2
Motif
Other DBs
NCBI-ProteinID:
CBL02880
UniProt:
D4K5M1
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All DBs
Position
2790782..2792914
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AA seq
710 aa
AA seq
DB search
MTYRAWEQKPLDRAAVRELTAAIAEQAAAQLEEQTMDEAPWSDEKYKAVLAAQQKENALL
AGILAARGITDPAEALTLLAGEEELSDPALLTDMDAACQRIWQAIDNGETIAVFGDYDVD
GVTATALLYQHLKGMGATVKCMLPSREGDGYGLSKNAIQSMHNKGCTLIVTVDNGISAVE
EADFAASLGMDLIITDHHLPPETLPKAVAVVDPRREDDHSPFKGLCGAGVAFKLCAALDG
CPPEEMLDYCGDLAAVGTVADVMPLVGENRTLVKAGLRQLQQTDRPGFGALLEEVGLAGK
PITAENISYAIAPRINAAGRMDNAVTALQLVLCEDPDRAEELAHKLNEINAHRQETEQQI
FKAAEELLEQQPERLDDRIMLLWGRDWHPGVIGIVASRLVERTGRPVIVVTIDEHGEGKG
SGRSVQGFNLHACIGSCADLLVRYGGHAMAAGLSVREENLPQLRRRLNEWAARECPVLHT
PPLTCDVAIHLDRITVECVRHLDQLAPYGAENPTPVFLLQSAVVDGVYPVSEGRHSRLRL
RQGNSCLYAVWFGMPAEQLPYALGDVVDAALNLSVYESARGAQLSGRIIDLHPAGLGAEL
ARQAALVQALRRGTPLTDEQKKQIAPARTDIIAVYRELQSRRWHAEDLQPLCAKLGEEQT
GKTLVAVAALEQVGLITAAEKGGAKFWELVPTAGKKNLGDAPILKCLEEL
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgacctaccgtgcttgggaacaaaaaccgctggaccgcgccgctgtgcgggaactgact
gccgccattgccgaacaggcggcggcacagctggaagagcagaccatggacgaagcgcca
tggtcagacgaaaaatataaggccgtgctggctgcgcagcaaaaggaaaacgccctgctg
gcgggcatccttgccgcccggggcatcaccgaccccgccgaggcgctgactctgctggca
ggggaggaggaactttccgaccctgccctgctgaccgacatggacgccgcttgtcagcgc
atctggcaggccattgacaacggcgagaccatcgcggtttttggcgattacgatgtggac
ggcgtgaccgccaccgccctgctgtaccagcacctcaagggcatgggcgcgaccgtcaag
tgtatgctgcccagccgcgagggggacggctacggcctgtccaaaaacgccatccagtcc
atgcacaacaaaggctgcactctcatcgtgacggtggataacggcatctctgccgtggag
gaggccgactttgcggcttcgctgggtatggacctgatcatcaccgaccaccatctgccg
ccggagactttgcccaaggccgtggccgtggtggacccccgccgggaggacgaccacagc
cccttcaagggtctgtgcggcgcgggcgtggccttcaaactttgtgccgcgctggacggc
tgcccgccggaggaaatgctggattactgcggcgaccttgccgccgtgggtactgtggcg
gacgtgatgccgctggtgggggagaaccgcacccttgtcaaggccgggctgcggcagctg
caacagaccgaccgccccggctttggggcacttttagaggaagtcggccttgcgggcaag
cctatcaccgccgaaaatatcagctacgccatcgcgccccgcatcaacgcggcaggccgc
atggataacgccgttaccgctttgcagctggtgctctgcgaggacccggacagggccgag
gaactggcgcacaagctgaacgagatcaacgctcaccggcaggagactgagcagcagatt
ttcaaagctgccgaggaattgctggaacagcagcccgagcgtctggatgaccgcatcatg
ctgctgtggggacgggactggcatcccggtgtcattggcatcgtggcttcccggctggtg
gagcgcaccggccgcccggtcatcgtggtcaccattgacgagcacggcgagggcaagggc
agcgggcgcagcgtgcagggctttaacctgcacgcctgcatcggctcctgtgccgacctt
ctggtgcgctacggcggtcatgccatggcggcgggactttccgtccgggaagaaaacctg
ccccagctgcgccgccgcctgaacgagtgggctgcccgggagtgcccggtgctgcacacc
ccgccgcttacctgtgatgtagccatccatctggatcgtatcacggtggaatgcgtgcgg
catctggatcagctggcaccctacggggcggagaaccccaccccggtgttcctgctgcaa
agcgccgtggtggacggcgtatacccggtatcggaggggcggcacagccgcctgcggctg
cggcagggcaatagctgcctgtacgccgtctggttcgggatgcccgccgagcagctgccc
tacgcgctgggcgatgtggtggacgcagcgctgaacctttcggtctacgagtccgcccgg
ggcgcgcagctctccggccgcatcatcgacctgcacccggcagggctgggcgcagagctg
gcacggcaggctgcactggtgcaggcactgcgccggggcacccccctgaccgatgaacaa
aagaaacagatcgcccccgcccgcacggatatcattgccgtgtaccgggaattgcagtcc
cgccgctggcacgccgaggatctgcagcccctgtgcgcaaagctgggcgaggagcagacc
ggcaaaacgctggtggcagttgccgctttggagcaggtggggctgatcaccgcagcggaa
aaaggcggggcaaagttctgggagctggtgccgacagcaggcaaaaagaaccttggcgat
gcccccatcctgaaatgtctggaggaactataa
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