Faecalibacterium prausnitzii SL3/3: FPR_30170
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Entry
FPR_30170 CDS
T02592
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
fpa
Faecalibacterium prausnitzii SL3/3
Pathway
fpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FPR_30170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpa03400
]
FPR_30170
Enzymes [BR:
fpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FPR_30170
DNA repair and recombination proteins [BR:
fpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FPR_30170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Helicase_C
Zn_ribbon_PriA
Glycos_transf_2
AAA_19
SLFN-g3_helicase
PIF1
Zn_Ribbon_TF
AAA_16
AAA_22
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
CBL03098
UniProt:
D4K689
LinkDB
All DBs
Position
3056276..3058537
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AA seq
753 aa
AA seq
DB search
MPKTVGVAVSNATFHFDKLYTYAVLPEHQNVVRLGSMVLVPFGKGSRARMGVVLACDAEP
EHSKLKYLFDVAPASACLTPELLRLVYFLKERTFCTYYEAVKAVIPYGAQYKPAVAADGV
TPVLQKQLTRHTENAYKLVGTLPQKPKPTAKQLAAVALLSGGPRTLNELEDKGISRAVLD
NLCTKGVLECSKVNKSIDLYASIPLRNDPITLTEQQQTAYDTLLPKLEDAAPHSALLYGV
TGSGKTLVFLKLISRCLELGRKALVLVPEISLTPQMILRLKGQFGRRVAVQHSALNHTER
LLQWQMIQDGGADIVVGTRSAVFSPLENIGLIIIDEEQEHTYRSESAPRYSAHEVARQRA
AENGALLLLASATPSTESFHAAQNGRTQLVRLTKRYGGNPLPSVQIVDMRAELAAGNPRE
ISLALEDAIRRNLEAEKQTILLLNRRGYQTIAQCEDCREVLKCPKCSVPMVYHKSAHKVL
CHYCGSQQEPPPTLCPACGGKLQYRGFGTQKAEEELAKLFPEARVLRMDQDSTAAKDAHE
KLLAKFAAHEYDIMVGTQMVAKGLDFEDVTLVGVLGIDSLLFAQGFRAYENVFSLITQVV
GRSGRAKEPGFAIIQTTDPDNPVLTLAAAQDYDAFYEQEIAYRKLGLYPPFCGLCIIGFA
GAKENEVARAAARFSALLGQQAAKQPDLPLRILGPTPGSIEKINDTYRYKLTVKCRNDRR
FRDLVRSTLALYEKEKLPSKASVVVDLHSDGDI
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaacggtaggcgttgccgtcagcaatgcgaccttccattttgataagctgtat
acctacgccgttctgccggagcaccagaatgtggtgcgtctgggcagcatggtactggta
cccttcggcaagggtagccgcgcccgcatgggtgtggtactggcctgcgatgccgagccg
gagcactccaagctgaaatatctgtttgacgtagccccggcttcggcctgcttgaccccg
gagctgctgcggctggtgtattttttaaaggaacgcaccttctgcacctactacgaggcc
gtcaaggcggtcattccgtatggtgcgcagtataagcccgccgtggcggcagacggtgtg
accccggtgctgcaaaagcagcttacccgtcacaccgaaaatgcctataagcttgtgggc
actctgccgcaaaagccaaagcctacggcaaaacagctggcggcggtggcgctgctgagc
ggcggccctcgcaccctgaacgaactggaggataagggcatcagccgcgccgtgctggat
aacctgtgcaccaagggtgtgctggaatgcagcaaggtgaataagtccatcgacctgtac
gcctccatcccgctgcgtaacgaccccatcaccctcacggagcagcagcaaactgcttac
gacacgctgctgcccaagctagaagatgctgcgccccattcggctctgttgtacggcgtt
accggcagcggcaagacgctggtgtttttaaagttgatttcccgctgtctggaacttggc
cgtaaggcgctggtgctggtgccggagatcagcctgaccccgcagatgatcctgcggctc
aaaggacagttcggccgccgcgtggcggtgcagcactctgcgctcaaccataccgagcgt
ctgctgcaatggcagatgatccaggacggcggtgcagatatcgtggttggcacccgcagc
gctgtgttttcgccgttggaaaatatcggtcttatcatcattgacgaggagcaggagcac
acctaccggtcggaatccgcaccgcgctactccgcccacgaggtcgcccggcagcgtgcc
gccgaaaacggtgccctgctgcttctggccagcgccacccccagcaccgagagcttccac
gctgcacagaacggacgcacccagctggtgcgcctgaccaagcgctacggcggcaacccg
ctgcccagcgtgcagatcgtggatatgcgggcagagctggcagcaggcaaccctcgggag
atcagccttgcgttggaggacgccatccgccgcaatctggaagcggaaaagcagaccatt
cttctgctcaaccgccggggctaccagaccattgcccagtgcgaggactgccgcgaggtg
ctcaagtgccccaagtgcagcgtgcccatggtgtaccacaaatcagcgcataaggtgctg
tgccactactgcggctcccagcaggagccgccgcccaccctttgcccggcctgcggcggc
aagctgcagtaccggggctttggtacccagaaggccgaagaggagctggcaaagctcttc
ccggaggcgcgggtgctgcgcatggatcaggactctaccgccgccaaggacgcccacgaa
aagctgcttgccaaatttgcagcgcatgaatacgatatcatggtaggcacccagatggtg
gcaaagggtctggattttgaggacgtgacccttgtgggtgttctgggcattgattcgctg
ctgtttgcgcagggcttccgggcatacgagaacgtgttcagcctgatcacacaggtggtg
ggacgcagcggccgcgcaaaagagcccggctttgccatcatccagaccaccgacccggac
aacccggtgctcacccttgccgccgcgcaggattacgacgccttctacgagcaggagatc
gcctaccgcaagcttggcttgtatccgcccttctgcgggctgtgcatcatcggctttgcc
ggtgcaaaggagaacgaggtggcgcgtgccgctgcccgtttctcggcgcttttagggcag
caggcggccaagcagccggatctgcccctgcgcattctgggtcctacgcccggcagcatt
gaaaagatcaacgacacctaccgctataagcttaccgtcaagtgccgcaacgaccgccgt
ttccgcgaccttgtgcgcagcacgctggcactgtatgaaaaagaaaaactgccgtctaag
gcatcggtcgtggtagacctgcactcggacggagacatctga
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