Flavobacterium pallidum: HYN49_01060
Help
Entry
HYN49_01060 CDS
T06077
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
fpal
Flavobacterium pallidum
Pathway
fpal03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HYN49_01060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpal03400
]
HYN49_01060
DNA repair and recombination proteins [BR:
fpal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HYN49_01060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
DUF4911
Motif
Other DBs
NCBI-ProteinID:
AWI27133
UniProt:
A0A2S1SL43
LinkDB
All DBs
Position
284222..285010
Genome browser
AA seq
262 aa
AA seq
DB search
MKALWKGGISFGLVNIPVRLYSGSVTHRIDLDMIRKKDHCAIEYVRVCKKDGKEVPWDEI
EKGYRRDDGDYVVLDKADFAKAMPEKTQTIDIFEFVLEDEIPSQYLEKPYIVEPEKSAMK
TYALLRAALKKSGKVGLAKFIIRSAEHLGILKVEDDAILLIQIRFDQDLRDPSEAKIPGE
ISIQKKELDMAMTIIDQMTDKFEPEKYKDTYKDELLKMIKKKLAEPKGKKSAKKEAPETK
AKKTDTDDLLSQLKASLEAMKN
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctttatggaagggcggcatcagcttcggcctggtcaatattccggttcgtttg
tacagcgggtctgttacccaccgcattgacctggacatgatccgtaaaaaggaccattgt
gccatcgaatatgtgcgtgtctgcaaaaaagacgggaaggaagtgccgtgggacgaaatc
gaaaaaggttaccgccgtgacgatggcgattatgttgtactggacaaagccgattttgcg
aaagcgatgcccgaaaaaacacaaaccatagacattttcgaattcgtactggaagatgaa
atcccttcacaatatctcgaaaagccttacatcgtagagcctgagaaatcagccatgaaa
acgtacgccttattgcgtgcagcgctaaaaaaatcgggtaaagtcggtctggcaaaattc
atcatacgcagcgcagagcatttaggcatcctgaaagtggaagatgatgcgattttgttg
attcagatacgcttcgaccaggatctgcgcgatccatcagaagcaaaaatcccaggagag
atttcaatccagaaaaaagaactcgacatggccatgacgattatcgatcagatgaccgac
aaatttgagcctgaaaaatataaagacacttacaaagacgagctcttgaaaatgattaag
aaaaaactcgccgaacccaaaggaaagaaatcagccaaaaaagaagctcccgaaaccaaa
gccaaaaaaacggacactgatgatttattgtcacagctcaaagccagtctcgaagcaatg
aaaaactaa
DBGET
integrated database retrieval system
