Flavobacterium pallidum: HYN49_01315
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Entry
HYN49_01315 CDS
T06077
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
fpal
Flavobacterium pallidum
Pathway
fpal02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fpal00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HYN49_01315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpal03021
]
HYN49_01315
Transcription machinery [BR:
fpal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HYN49_01315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
PgaD
GPW_gp25
Motif
Other DBs
NCBI-ProteinID:
AWI24637
UniProt:
A0A2S1SE38
LinkDB
All DBs
Position
350686..351549
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AA seq
287 aa
AA seq
DB search
MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQKIKAGDQRALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKMYALLEQSNERPPSAEEIAKELDMTVNDVKESMKNSGRHL
SMDAPLVEGEDSNLYDVLRSGESPNPDRELIHESLRTEIERSLETLTPREADVVRLYFGL
GDQHPMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactcaaaattacaaagcaggtaaccaacagggaaactgcttcactcgacaag
tacttacaggaaattggaaaagtggacctcattaccgctgacgaagaggtagaattagca
cagaaaatcaaggccggagaccagagagcgttggaaaagcttaccaaagccaaccttcgt
ttcgttgtttctgtggccaaacaataccaaaaccagggattaacccttcccgatctgatc
aatgaaggaaaccttggtttgattaaagctgcacaaagatttgacgaaacacgtggtttt
aagttcatttcttacgccgtttggtggatccgccaatcaatccttcaggctttggcagaa
cagtcacgtatcgttcgtttgccgctgaataagatcggttcgatcaataagattaacaag
atgtacgcgctattggagcagtccaacgaacgtccgccttcagcagaagaaattgcgaaa
gagctggacatgacagtaaatgatgtgaaggaaagcatgaaaaattccggtcgtcacctg
tcaatggatgccccgcttgtggaaggtgaggattcgaacctttacgatgttttgcgttca
ggagagtctccaaacccggaccgtgagttgatccatgagtcattgcgtactgaaattgag
cgctctttggaaacattgacacctcgtgaagctgatgtggtgcgtttgtatttcggattg
ggagaccagcatccgatgactttggaagaaatcggtgaaacttttgacctgacccgtgag
cgtgttcgccagatcaaggagaaggccatcagaaggctgaagcacacttcaaggagcaaa
atcctgaagacgtatctgggctaa
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