KEGG   Flavobacterium pallidum: HYN49_01595
Entry
HYN49_01595       CDS       T06077                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
fpal  Flavobacterium pallidum
Brite
KEGG Orthology (KO) [BR:fpal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fpal03400]
    HYN49_01595
Enzymes [BR:fpal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HYN49_01595
    5.6.2.6  RNA 3'-5' helicase
     HYN49_01595
DNA repair and recombination proteins [BR:fpal03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HYN49_01595
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII DUF5363 T4SS-DNA_transf DUF2639
Other DBs
NCBI-ProteinID: AWI24688
UniProt: A0A2S1SE71
LinkDB
Position
complement(408762..411230)
AA seq 822 aa
MNRAKLFEIADNWFKTQGWKSFPFQKETWTAFLQGKNGLLNAPTGSGKTYALWIPVVLNY
IKQNPDYQNKHKPGLKAIWITPLRALSVEIKQAAERVVNDLDAKMTVGIRSGDTPAGERA
KQKDKMPDLLVTTPESLQLLLASKGYEKVFKDCSAIIIDEWHELLGTKRGVQVELALSRL
KSITDDMRIWGISATIGNLQQAQEVLLGVKSAALQNSVLIHAHINKKIKILSIIPEKMEA
YPWRGHMGLHLIDEVADIIRKSRTTLIFTNVRSACEIWFQRLLEKYPEFAGEMAMHHGSI
NRDTRLWVEQAIRDEQLKVVVCTSSLDLGVDFAPVETIIQVGGPKGVARFMQRAGRSGHQ
PGKESVIYFLATYAMELIEASALKKAVADTVVEDRVPYLNSWDVLVQYLNTLAVSDGFFP
DEIYKEVKGTFCYQAMTPEHWQWLLNFITKGSQSLQAYDEYKKVDILENGLFKITSRRIA
MHHRMQIGTIVGDAVMNVKFLGGSFIGTIEEWFISKLKPGDVFTFAGRKLELFQVKNMQV
IVRRADNAKSSKLTSWMGGRLSFSAQMSEMLRQEMYLANTDKLTPELKAMAPVFKRQRKE
SIVPSADEFLIEMFKSREGFHAIFYPFEGRFVHEALASLLAYRISLLSPISFSLAYNDYG
FELLSDQEIDIQGVLDNNLFSAEYVHHDLQHSLNATEMARRKFRDIAVIAGLVFTGYPGQ
LIKTKHLQSSSQLLFAVFRDYEPDNLLLQQAYRETFEHQLEEGRLILALERIATQNIVVK
KCDKPTPFSFPIITDRLREKLSSETLADRIAKMTASFMKNEK
NT seq 2469 nt   +upstreamnt  +downstreamnt
ttgaacagagcaaaacttttcgaaatagccgacaattggtttaaaacccagggctggaag
tcgttcccattccaaaaagaaacctggacggctttcctgcagggcaaaaacggtttgctc
aatgcgcccaccgggagcgggaaaacatatgcgctttggatcccggtcgtgctcaattac
atcaagcaaaatccggattatcaaaacaaacacaaaccgggattgaaagccatctggatt
acgcctttacgagccttatcggtggaaataaaacaggcggcggaacgggtcgtgaacgac
ctcgatgcgaagatgaccgtcggtatccgcagtggcgataccccggcgggtgaacgtgca
aagcagaaggacaaaatgcctgacttgctcgtcactacccccgaaagtttacagctttta
ctcgcttcaaaaggatatgaaaaggtgtttaaggattgcagcgccatcattattgacgaa
tggcacgagttgcttggtaccaaacgtggcgtacaggtggaattggcattgtcacggtta
aaatcgattacggatgatatgcggatttggggcatttcggcaaccatcggcaacttgcag
caggcgcaggaagtattgttaggcgtaaagtcggcagcgttgcaaaattcggtgttaatc
catgcgcatatcaataaaaaaattaaaatactgtcaatcattccggaaaaaatggaagcc
tatccgtggcgcgggcatatgggtttgcacttaatcgatgaggtggccgatattatccga
aaaagcaggactacattgatctttaccaatgtgcgttcggcctgcgaaatctggttccaa
cggcttttggaaaaataccccgaattcgccggcgaaatggcgatgcaccatggcagcatc
aaccgcgatacgaggctgtgggtcgagcaggccattcgtgacgagcaattgaaagtcgtc
gtttgtacttcaagcctggatttgggtgtcgattttgcgcccgtagaaaccattattcag
gtaggcggacccaaaggcgtggcgcgttttatgcagcgtgcgggccgcagcgggcaccag
ccgggtaaggaaagcgtgatttatttccttgcgacttatgccatggaactcattgaagct
tctgcgctcaaaaaagccgttgccgataccgttgtcgaagaccgtgtaccctacctgaac
agctgggatgttttggtacaatacctcaatacgctcgccgtttcggatggattttttcct
gacgaaatttacaaggaagtgaaaggaacattctgctatcaggcgatgacaccagaacat
tggcaatggttattgaactttattacaaaaggcagccaaagtttacaggcctacgacgaa
tataaaaaagtagatatccttgaaaacggattgtttaaaattaccagcagaaggattgcg
atgcaccaccggatgcagattggaacgattgtgggagatgccgtgatgaacgtcaaattc
ctgggcggcagttttatcgggacgattgaggaatggtttatatcgaaactgaaaccgggc
gatgtgtttacgttcgcaggaaggaagctcgaattgttccaggtgaaaaacatgcaggtc
atcgtacgccgtgccgataatgctaaaagttcaaaactcacaagctggatgggcggcagg
ttatcattctcggcgcaaatgagcgaaatgctgcggcaggaaatgtatcttgccaatacc
gacaaactgactcccgaacttaaagccatggcacccgttttcaaacgccagcgaaaggaa
tccatcgttccttctgccgatgaattccttattgaaatgttcaagtcgcgcgaaggtttc
catgcgatattttatccgtttgaaggacgcttcgtgcatgaagccctggccagccttttg
gcctatcgcatcagtttgctgtcaccgatttcgttttctttggcctataatgactacgga
tttgaactgctttcagaccaggaaattgatattcaaggcgtattggataacaatttgttt
tcggccgaatacgtgcaccatgatttgcagcacagcctgaatgctacggaaatggcaagg
cggaaattccgcgatattgctgtgattgcgggattggtatttacaggttatccggggcaa
ttgattaaaacgaaacatttgcaaagtagttcgcaattgctttttgccgtgttccgggat
tatgaacctgataatttattgctccaacaggcgtaccgcgaaacgtttgagcaccaattg
gaagaagggcgtttgattttggctttggaaagaatcgcgacacagaatatcgtcgtcaaa
aaatgcgataaacctacaccttttagtttcccgatcattaccgacaggcttcgggagaaa
ctcagcagtgaaaccctggccgaccgtattgcaaaaatgacagcttcctttatgaaaaac
gaaaaatga

DBGET integrated database retrieval system