Flavobacterium pallidum: HYN49_02250
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Entry
HYN49_02250 CDS
T06077
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fpal
Flavobacterium pallidum
Brite
KEGG Orthology (KO) [BR:
fpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpal03016
]
HYN49_02250 (truB)
Enzymes [BR:
fpal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HYN49_02250 (truB)
Transfer RNA biogenesis [BR:
fpal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HYN49_02250 (truB)
Prokaryotic type
HYN49_02250 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AWI24804
UniProt:
A0A2S1SEK9
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All DBs
Position
complement(564865..565551)
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AA seq
228 aa
AA seq
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MTAEDFQNGQILLVDKPLHWSSFQAVNKMKWALKSKLGIRKIKIGHAGTLDPLATGLLIV
CTGKFTKRITELQGQEKEYTGTFHIGATTPSYDLETEINETFPTLHIDADLIHETVKQFL
GEIDQKPPVFSAIKKDGKRLYEHARAGETVEIASRKTTIHEFEITRIALPEIDFRVVCSK
GTYIRSLAFDFGKALQSGAHLTALRRTKIGHYHVNDAQPVPDFENSLS
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggaagatttccagaacggacagatcctgttggttgataagcccctgcattgg
tcgtcattccaggcggtcaataaaatgaaatgggcactcaagagcaaactcgggatcagg
aaaatcaaaatcgggcacgccggtacgctcgatccattggcgaccggattgctgatagtc
tgcaccggaaaattcaccaagaggattacggagttgcagggccaggaaaaagaatatacc
ggaacattccacattggtgcgaccacaccttcttatgatttagaaaccgaaataaacgag
actttcccaacgttacatattgatgcggatttgatacacgaaaccgtaaaacagttcctt
ggcgaaatcgaccagaaaccccccgttttttccgcgataaaaaaagacggcaagcgattg
tacgaacatgcccgtgccggtgaaaccgttgaaatcgcttccaggaaaaccaccatccac
gaatttgaaatcaccagaattgcactgcccgaaatagacttcagggtcgtttgcagtaaa
gggacttacatccgttcgctggcttttgattttggaaaagcactgcagtccggagcacac
cttaccgcattgcgccgcaccaaaataggccattaccatgttaacgatgcacaacccgta
cccgattttgaaaacagcctgtcttaa
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