Flavobacterium pallidum: HYN49_05345
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Entry
HYN49_05345 CDS
T06077
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fpal
Flavobacterium pallidum
Pathway
fpal03030
DNA replication
fpal03410
Base excision repair
fpal03420
Nucleotide excision repair
fpal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYN49_05345
03410 Base excision repair
HYN49_05345
03420 Nucleotide excision repair
HYN49_05345
03440 Homologous recombination
HYN49_05345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpal03032
]
HYN49_05345
03400 DNA repair and recombination proteins [BR:
fpal03400
]
HYN49_05345
Enzymes [BR:
fpal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYN49_05345
DNA replication proteins [BR:
fpal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HYN49_05345
DNA repair and recombination proteins [BR:
fpal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HYN49_05345
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYN49_05345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
FYRC
Motif
Other DBs
NCBI-ProteinID:
AWI25369
UniProt:
A0A2S1SG69
LinkDB
All DBs
Position
complement(1324322..1327153)
Genome browser
AA seq
943 aa
AA seq
DB search
MSQKRLFLLDAYALIFRGYYALIKNPRINSKGMDTSAILGFMNSLIDVIKREKPDHLAVA
FDKGGSHVRTEMFTAYKANRDETPEAIRIAIPYIQQLLKAMHIPILELEGCEADDLIGTI
AKQAANQNYQVFMVTPDKDFAQLVSENIFMYKPARLGNGIEIWGIPEVLDRFEIERPEQV
IDFLGMMGDAVDNIPGLPGVGEVTAKKFLKEFGSMENLLENTDKLKGKMKENIEANKALG
LLSKQLATILCDCDVTFNEDDYELSKPDADKVEEIFRELEFRRLAEQFNSLFFSDQKNYS
NIETQGLPPTKTIVKTDQFDLFSTQESADDASGQINSYYKTLENTDHHYQLAETDMAIKF
LIQNLLKQTAVSFDTETTGIDALNAELVGLSFAWEKGKGFYVPVPENREAAQALVDKFAP
FWDSESIEKIGQNLKYDLKVLSNYGVTVKGKLFDTMIAHYLINPDMRHNMDVLSETYLQY
SPKSIEELIGKKGKNQKSMRDVALEDIKEYAAEDADVTFQLKEHFAPVLDKTETRKLFEE
LEIPLVPVLAAMETEGVRLDTDFLKAMSVEMDNDIKIFENRIYETAGEKFNLASPKQLGE
VLFDKMKIGEGKQKKTKTGQYATGEEVLSYLALSSPFVQDILDWRQLVKLQSTYVTALPT
QVCQRTGRVHTDYMQAVAATGRLSSNNPNLQNIPIRTERGRQIRKAFVPRDENYTLVSAD
YSQIELRIIAALSGEENMIRSFQNGEDIHAATASKVFNVVLDEVTREQRSHAKTVNFGII
YGVSAFGLSNQTSLTRSESKDLIDAYYQTYPRLRNFISEQIEIAREQGFVQTILGRRRYL
KDINSANAIVRGAAERNAVNAPIQGSAADIIKIAMINIHKKLVSENWKSKMLLQVHDELV
FDVHNSELEKIQPMIKYEMENAYKLDVPLEVDLGMGQNWLEAH
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaaacgccttttcctgcttgatgcctacgcgctgattttccgcggctattat
gcgctgatcaaaaaccccagaattaattcaaaaggaatggacacatccgccattcttggg
tttatgaattccctgatcgatgttattaaaagggaaaagccggaccatcttgccgtagcg
tttgacaaaggcggcagccacgtgcggaccgaaatgtttaccgcctataaagcgaatcgt
gacgaaaccccggaagccatccgcattgcgattccatacatccagcagttgcttaaagcg
atgcacatcccgattttggaactggaaggctgcgaagccgatgacctgatcggtaccatt
gccaaacaggcagcaaaccagaattaccaggtttttatggtcacacccgataaggatttt
gcacaattggtttccgaaaatatttttatgtacaagcctgcgcgtcttggcaatggcatt
gaaatctggggtattcccgaagtgcttgaccgttttgagatcgagcgcccggaacaggtg
attgatttccttgggatgatgggcgatgctgtagacaacatccccggtcttcccggcgtg
ggtgaagtgaccgcgaaaaaattcctgaaggaattcggttccatggaaaatctactggaa
aatacagacaagcttaaggggaagatgaaagaaaacatcgaagccaataaagcgcttggc
ttactgtcaaaacaattggcgacgattttatgcgattgcgatgtcactttcaatgaagac
gattacgaattgtcaaaaccggatgccgataaggttgaggaaattttccgcgaactcgaa
ttccggaggttggcagagcagttcaacagcctgtttttcagcgaccagaaaaactattcc
aatattgaaacgcagggactgcctcctacgaaaaccattgttaaaaccgatcagttcgat
ttgttttcaacccaggaaagtgcagacgacgcttcaggacagatcaacagttattataaa
accctcgaaaacacggaccaccattatcaattggcagaaactgatatggcgataaaattc
ctgatccaaaacctgctgaagcaaaccgccgtcagttttgataccgaaactaccgggatt
gacgcgttgaacgccgaactcgtcggattgtcatttgcatgggaaaaaggaaaagggttt
tatgtcccggttcctgaaaaccgcgaagcggcacaggctttggtggataaattcgcaccg
ttctgggattcagaatcgattgaaaagatcgggcagaatttaaaatatgacttaaaggtg
ctgtccaattacggcgtaacggtcaaaggaaaactgtttgacaccatgattgcgcactac
ctgatcaatccggacatgcgccataatatggatgtattgtctgaaacgtatttgcaatac
tccccgaaatccatcgaagagctgattggcaagaaaggcaagaaccagaaatcgatgcgc
gatgttgctttggaagacatcaaggaatacgccgctgaagatgccgatgtcacattccag
ctgaaagaacatttcgccccagttttagataaaaccgaaacccgtaaactgtttgaggaa
ctcgaaattccactggtgcctgttttagccgccatggaaaccgaaggcgtgcgcctcgat
actgatttcctgaaagccatgtctgttgaaatggataacgatatcaaaatattcgaaaac
cggatttatgaaaccgcaggtgagaaattcaacctcgcatccccgaaacaattgggcgaa
gtcctttttgacaaaatgaaaatcggcgaaggcaaacagaagaaaaccaaaaccggtcaa
tatgccactggtgaagaagtgctttcgtatctggcgctttcaagcccttttgtacaggac
atcctggactggcgccaactcgtgaaactacaaagcacctatgtcaccgcattgcctacg
caggtttgccaaaggaccggacgtgtccacaccgattatatgcaggccgtagcagcaaca
ggacgtttgagctccaataatccgaacctgcagaacatcccaatccgtacggaaagaggc
cgccagatccggaaggcttttgtgcccagggatgaaaattacaccctggtttccgcggat
tattctcagatcgaattgcggattattgcagccttaagcggtgaggaaaacatgatccgt
tcgttccagaacggcgaggacatccacgcggcgaccgcttcaaaggtattcaatgtcgtt
ttggatgaagtgacccgggagcagcgaagccacgccaaaacggtaaacttcgggattatt
tacggcgtatccgcttttggattgagcaaccagacgtcgttgacacgcagtgaatccaaa
gacctcatcgatgcctactaccagacttatccaaggcttcgcaatttcatcagcgagcaa
attgaaatcgcacgcgagcagggattcgtgcaaacgattttaggccgccgacgttacctg
aaagacatcaattcagccaatgcgatcgttcgtggcgctgccgagcggaatgcggtgaat
gcgcctatccagggaagcgccgccgacatcatcaagattgcgatgatcaacatccataaa
aaactggtttcggaaaactggaaaagcaagatgctgctgcaggtacatgatgaattggtg
tttgatgtccacaattcagaactcgaaaaaatccagcccatgatcaaatacgaaatggaa
aatgcttataagcttgatgtcccattagaagtggatctcggaatggggcagaattggctt
gaagcgcattaa
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