Flavobacterium pallidum: HYN49_05465
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Entry
HYN49_05465 CDS
T06077
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
fpal
Flavobacterium pallidum
Pathway
fpal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HYN49_05465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpal03400
]
HYN49_05465
Enzymes [BR:
fpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYN49_05465
DNA repair and recombination proteins [BR:
fpal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HYN49_05465
RecFOR pathway proteins
HYN49_05465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_22
AAA_5
Mg_chelatase
AAA_3
nSTAND3
TIP49
AAA_14
AAA_16
NB-ARC
AAA_PrkA
AAA_18
RNA_helicase
TsaE
Rad17
AAA_28
AAA_33
Torsin
AAA_17
AAA_24
ABC_tran
DUF5416
NPHP3_N
AAA_11
Sigma54_activ_2
NACHT
Motif
Other DBs
NCBI-ProteinID:
AWI25389
UniProt:
A0A2S1SG86
LinkDB
All DBs
Position
1354313..1355335
Genome browser
AA seq
340 aa
AA seq
DB search
MNENLNPTNKHFNNEELDLEKKLRPLAFDDFSGQDQVLDNLKVFVEAANQRNEALDHTLF
HGPPGLGKTTLANILANELGVGIKITSGPVLDKPGDLAGLLTNLEERDVLFIDEIHRLSP
IVEEYLYSAMEDFKIDIMIESGPNARSVQIGLNPFTLVGATTRSGLLTAPMRARFGIQSR
LQYYTTELLTTIVQRSSAILKMPITMEAAIEIAGRSRGTPRIANALLRRVRDFAQIKGNG
KIDIEIARYSLKALHVDAHGLDEMDNKILNTIIDKFKGGPVGLSTLATAVSESSETIEEV
YEPFLIQEGFIMRTPRGREVTEKAYKHLGKVKIGIQGGLF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagaacctgaatccgaccaacaagcatttcaacaacgaggaacttgatcttgaa
aagaaattgcgcccactggcttttgacgatttttcaggccaggaccaggtgcttgacaat
ttaaaagtatttgtcgaggcagccaaccaacgcaatgaagctttggaccatacgttgttt
catggccctccgggattggggaaaaccactttggcaaacatccttgccaacgagttgggt
gtcgggattaaaatcacttccggcccggttttagataaacctggtgatcttgcgggattg
cttacgaatttagaagagcgcgacgttttattcattgatgaaatccatcgtttaagcccc
atcgtggaagaatatttgtattctgcaatggaggatttcaagattgatatcatgattgaa
tccggcccgaatgccagaagcgtacaaatcgggttgaatccattcacacttgtcggtgcg
accacacgctccggattattgaccgcgccgatgcgtgcccgtttcggcatacaaagtcgg
ctgcaatattatacgaccgaattgcttaccaccatcgtccagagaagttctgcgatcctc
aaaatgcccatcaccatggaagcagcgattgaaattgcgggacgcagccgtggcacgccg
cgtattgcgaatgccttgctgcgccgcgtacgcgatttcgcccaaatcaaaggcaacggt
aaaatcgatattgaaatcgcgcgttattctttaaaagccctgcacgttgatgcgcacggc
cttgatgaaatggacaataagatcctgaacaccatcatcgataaattcaaaggcggcccc
gtcggattgtccactttggccaccgcggtttccgagagcagcgaaactatcgaagaggtc
tacgaaccgttcctgattcaggaagggtttattatgcgtacgccacgagggcgtgaagta
actgagaaggcttataagcatctgggtaaagtgaagataggcattcagggaggcttattt
taa
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