Flavobacterium pallidum: HYN49_09240
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Entry
HYN49_09240 CDS
T06077
Name
(GenBank) gliding motility protein
KO
K20276
large repetitive protein
Organism
fpal
Flavobacterium pallidum
Pathway
fpal02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fpal00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HYN49_09240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IgGFc_binding
CHU_C
Motif
Other DBs
NCBI-ProteinID:
AWI26065
UniProt:
A0A2S1SI50
LinkDB
All DBs
Position
complement(2266344..2271422)
Genome browser
AA seq
1692 aa
AA seq
DB search
MKKVLFFLCLLLAANCFSQFSKTHYIPPLSNSDAQEPQGQFMYISCPSLTPVNFRIIALG
GEVVNGTVTRDNPYVFNIGAGFDTQLLVSSFSVNSVMQNKGYIVEAEDQVYVTVRMTTTP
MNFQGGGLVSKGLAALGTQFRVGAFINTLIPSTNENHYTFASVLATDNNTEVTFTPPPAN
TGITLINHETFNNTPQTVTLNRGESFTIAVQGPNNANDDGLIGTLISSNKPIAVNCGSIA
GTDGDASNLDLGFDQIVSAERTGSEYIFIKGNGLDVVERPLVVANEPNTEVFLNGDPTPT
ATLDAGQYLSLNGANYGPNGNLYIRTSHNVFAYQGMGGQISQANQNMCFLPPLSCETPRV
IDNIPLINQIGSLNDFIGTVNIVTEIGATLSFIINGETYSFADLPPGITANGPFSVPGNT
AYETYTFQGLQGNISVYSTKQVYLSYFGSSGAATYGGFYSGFTFKPEVAFKNLDTSMASN
CIPNIELSVNVLTAFDEFQWYFNDVAINGATGRTYIPDAPGFYYVKAGISACNTELISDK
IPVSSCAPDSDNDGINDNADVDLDNDGISNCVESDGNASLDLSPASTGQIQVGTYMNQYS
FSAGPATGPQVPTPFNGSATGSFIMETVAGIGNTTSEQFNFTNPASIVLDYPATADVNDF
LTPDGEYKLQVSTDKTITLLNPDDQLLVDTNYDGIFESGITQFSSFEVRFRLNGSLPLTA
GSGTFSFRAKDVTSLIFTQKNLIDSGNTKATFGLSLPCLPKDTDGDGIADRSDSDSDNDG
IPDSIEAVGNLTINAIITDENHNGMNDTIEPGLGQLDTDGDNVPDFYDLDSDNDGIYDVT
ESGSNATDANRDGVIDGNAFGINGLLDALETAPDSGILNFNIANTDSIDNIPDSLSADSD
GDGCNDVIEAGLNDGDGDGRLGVAPVTVNPANGKVTSATGYSALPNNNYIIAAPIIINTQ
PINQTGCEAQQVTFTIDTNTVNGYKWQVGSNEAGFTDLVNNTQYSGVDTASLTVSMLTPS
MSGNHYRVLLQKDGNSCGLVSALATLTVLARPVVAASITLVQCDDDLDNLSDFNLRQKES
QISANAANETFAYFTTQNGAETNDVSEQITNETVYNNSNGNTVWVRITNNDGCYNVTRID
LIVSATQIPAGFSRSFSECDDFLDVLNDDHDGITGFNFSSVTADINAILGNGSNYTIKYY
KNEADALQENDAAGNALAINDVSNYRNTGYPNQQFIWVRIDSNADNACFGLGPYITLTVE
ALPLFHAVPLQKECDRDVSDAIIDHDFQTAGLQDAILNGQADVSVAYFDQDNNPLPSPLP
NPFRTATQNIRVVLTNDNGRHCTEEGTISFIVYARPVAHAVTVPAQCDDLPDDSDGIVAF
DTTTIESDLLQGQTGFIIKYFDEDGTPLSSPLPPTFQSRTQNVRAVVENPLNPDCADATM
IAFTVNPLPEILDDNEEIICSGIVNESVTLYAGLANGNPGSYAYEWARNGILIPNAIIDF
LTVDEDGVYTTKIINKITGCSRTRTNTVEYSQTATITTVDIDDLSDVNSISINVTGVGNY
QYSLDNPVGPFQDSAYFDNVTPGLHEVFVNDKNGCGMATKTVAVVGAPAFFTPNGDGYND
YWKIKGMNALYHKNSIVYIFDRYGKLLTEIPSGADMGWDGIYNGNPLPADDYWFLLKLDD
GRTARGHFALKR
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtgttgtttttcttgtgtctgctgctggctgcaaactgtttttcacaattc
agtaagacacattacataccaccactttcaaattctgatgcacaggaaccccaggggcag
ttcatgtatatttcctgccccagccttacaccggtaaatttccggatcatcgctttgggt
ggtgaagtggtcaatggcaccgtaacccgtgacaatccttacgtattcaatatcggtgcc
ggattcgatacgcaacttttggtgagttcgttcagcgtaaattcggtgatgcagaacaaa
gggtatatcgtcgaggccgaggaccaggtctatgtcacggtcaggatgaccacaacacca
atgaattttcagggtggcggattggtttcaaaaggactggcggcgctcggcacgcagttt
cgggtaggagctttcatcaataccctgatcccttcaaccaatgaaaatcattacactttt
gcttccgtattggcgacagacaataacacggaagtcactttcactcctcctcccgcaaat
accggaattaccttaatcaaccatgaaaccttcaataataccccgcaaacggtaacttta
aaccgcggtgaaagttttaccatcgcagtgcagggcccgaacaatgccaacgacgacggt
ttgatcggaacattgatcagttccaataaacccatcgccgtaaactgcggttctattgcc
ggtactgatggagatgcttcgaaccttgacctcgggtttgaccagatcgtttcggcagaa
cgcaccggaagcgaatacatcttcatcaaaggaaatggcctagatgttgtggaacggccg
cttgtcgttgcaaacgaacccaatactgaggtgttcctcaatggtgatccaacgccaact
gctaccctcgatgccggacaatatctctcattaaacggtgctaattatggccctaacggc
aatttatatatacgcacatcacacaacgtttttgcttatcagggaatgggaggccagatc
agccaggccaaccagaatatgtgtttcctgccgccactgagttgtgaaaccccaagggtg
attgataatatcccgttaatcaatcagatcggcagcctcaatgactttataggtacggtg
aatattgtgacggaaattggcgccacgctgagtttcatcatcaatggcgaaacatattca
ttcgcagatttgccgccggggattactgcaaacgggccttttagtgttcctgggaataca
gcttatgagacgtatactttccagggacttcagggtaacatctcggtctattctacgaaa
caggtatatctttcctatttcgggtcaagcggtgccgcaacttacggtggattttattca
gggttcacgttcaagcccgaagtggctttcaagaacctggataccagcatggcatcaaac
tgcatcccgaatatcgaactgtctgtcaatgtcctcactgcattcgacgaatttcaatgg
tattttaacgatgttgccattaatggcgctacgggcaggacttatattccggatgctccg
ggattttattacgtaaaagccgggatttcagcttgtaatacggaactgatttcggacaaa
atccccgtaagttcctgcgcaccggacagcgataacgacggcatcaatgacaatgccgac
gtagacctggataatgacggaatttccaattgtgtcgaatctgacggaaatgcctcactg
gatttatcgcctgccagtacagggcaaatacaggtcgggacttatatgaatcaatattcc
ttttccgcaggcccagctaccggtccccaggtaccaacaccttttaacggaagtgccaca
ggaagttttatcatggaaaccgttgccgggattggaaacaccacatcggaacagttcaat
tttacgaatccggccagcatagtacttgactatccggccacggcagatgttaacgacttc
cttactccggatggggaatataaactccaggtatcaaccgataagaccatcacgctgtta
aatcctgatgaccaattgctggttgatacgaattatgacgggatttttgaaagtggcatc
acacaattttcatcatttgaagtacgtttcaggcttaatggcagtttgccactcaccgca
ggaagtggtactttttcattcagggcaaaagatgtaacgtcattgatttttacccaaaag
aacctcatcgattccggaaataccaaagctacattcggcttatccctgccatgccttcca
aaagacactgatggcgatggcattgcagataggagtgattccgattcagacaatgacggt
atcccggacagcattgaagctgtgggcaatcttacgattaacgctattattaccgatgaa
aaccataatggaatgaacgacactatcgagcccgggcttggccaactcgataccgacggt
gacaatgtacccgatttttacgatctcgacagtgataatgacggaatttatgatgtcacg
gaatctggttcaaatgctaccgatgccaatcgtgacggcgttattgacggcaatgcattc
gggataaatggcttattggatgctttggaaactgcgcctgacagtggcatactgaatttc
aatattgccaatacggacagcattgacaatatcccggattctttatcagcagacagtgat
ggggatggctgtaatgatgtcattgaagcagggcttaacgatggcgatggcgacggaaga
ttaggagttgcgccggttaccgtgaatccggccaatggcaaagtcacttcggcaacgggc
tattcggcgttgcctaacaacaattacattatcgctgcgccaatcattattaacacccaa
cctataaaccagactggttgtgaagcccaacaggttacttttacgattgacaccaatacg
gtcaacggctataaatggcaggtcggctcaaatgaagcaggttttacggatcttgtaaac
aatacccaatattccggcgttgacaccgcttcgctgacggtttccatgctcacgccatcc
atgtcaggcaaccattatcgcgtgctgctccaaaaggacggcaacagttgcggcctggtt
tctgcattggctacacttacggtattggcgaggcccgtcgtagcagcttcaataacttta
gtccaatgtgatgatgacctggacaatctttcggatttcaatctcaggcaaaaggaaagc
cagatttctgccaatgcggcaaatgaaacttttgcttatttcaccacccaaaatggtgca
gagaccaatgatgtcagcgaacagatcaccaacgagaccgtttataataatagtaacggc
aatacggtttgggtgcgcattacaaacaatgatggctgttataatgtgacacgcattgac
cttatcgtatcagccacacaaatacctgccggtttttccaggtcgttttcagaatgtgac
gattttttagatgtgttaaatgatgaccacgatggcattacaggatttaacttcagttca
gttacggctgatatcaatgctattttaggcaacggcagcaattataccatcaaatattac
aaaaacgaggctgatgccttgcaggaaaacgatgctgcaggaaatgcattggccatcaat
gatgtttccaattaccgtaatactggctatccaaaccagcagttcatctgggtgcgtatc
gacagtaatgccgacaacgcctgtttcgggcttggtccctatatcacactgactgttgag
gcactaccactgtttcatgcggtgccgttacaaaaagaatgtgaccgtgatgtgtcggat
gctattattgatcacgatttccagacggcaggactgcaggatgcgatattgaacggacag
gcagatgtaagtgtggcctattttgaccaggacaacaatccgttaccgagtccattaccg
aatcctttcaggacagcaacccaaaacatcagggtggtgctcactaatgataatggcagg
cattgtactgaagaaggcaccatttcttttatagtctatgcaaggccggtagcacatgcc
gtgactgttcctgcgcaatgtgatgacctcccggacgacagcgatgggattgtcgcgttt
gataccaccaccatcgaatcggatttattgcagggacagacaggattcatcataaaatat
tttgatgaagatggcacgccgctttcaagtccgttgccgcctactttccaaagccgcaca
caaaacgtgagagctgtagtggaaaatccgttgaatcctgattgtgcagatgctaccatg
attgccttcactgtaaatccactgcctgaaatacttgacgataatgaggaaattatttgc
tcaggcattgtcaatgaaagcgtcacactgtacgccgggcttgcaaacggcaatccgggc
agttacgcctatgaatgggcaagaaatggcatccttatcccaaatgccattatcgacttt
cttactgttgacgaggatggcgtatacaccaccaaaattatcaataaaattacaggctgt
tccaggacgaggaccaatacggtcgaatattctcaaacagcaaccatcactacggtggat
attgatgacctttccgatgtgaattcaataagcattaatgtcacgggggttggaaattat
caatacagccttgacaatcctgtagggccgttccaggacagcgcttattttgacaatgtg
acaccgggattacatgaggtttttgtcaatgataaaaatggttgcggaatggcaactaaa
accgtagccgtagtaggtgcaccagctttcttcacgccgaacggcgacggttataatgat
tactggaaaataaagggaatgaatgcgctttaccataaaaattccatcgtttatattttt
gaccgttatggtaaattactcacggaaatcccctcgggtgctgatatgggctgggacggt
atatacaatggaaacccgctgcccgccgatgattattggttcctgctgaaactcgatgac
ggccgcacggcaagaggccattttgcactcaaacgataa
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integrated database retrieval system