Flavobacterium pallidum: HYN49_09925
Help
Entry
HYN49_09925 CDS
T06077
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fpal
Flavobacterium pallidum
Pathway
fpal03420
Nucleotide excision repair
fpal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HYN49_09925
03430 Mismatch repair
HYN49_09925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpal03400
]
HYN49_09925
Enzymes [BR:
fpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYN49_09925
DNA repair and recombination proteins [BR:
fpal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYN49_09925
MMR (mismatch excision repair)
Other MMR factors
HYN49_09925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
ResIII
DUF6501
NTP_transferase
Motif
Other DBs
NCBI-ProteinID:
AWI26191
UniProt:
A0A2S1SIH7
LinkDB
All DBs
Position
2415797..2418121
Genome browser
AA seq
774 aa
AA seq
DB search
MQHHISQLNEAQQQPVLHKDGPMIIIAGAGSGKTRVLTIRIAYLMSLGVDAFNILALTFT
NKAAREMKKRISDIVGSTEAKNLWMGTFHSVFARILRAEADKLGYPSNFTIYDTQDSVRL
ISAIIKEMQLDKDIYKPKQVFGRISSYKNSLITVKAYFNDPELQEADAMSKKPRIGEIYQ
NYVDRCFKAGAMDFDDLLLKTNELLNRFPDVLLKYQNRFKYILVDEYQDTNHSQYLIVRA
LSDRFQNICVVGDDAQSIYAFRGANINNILNFQKDYEGVKTYRLEQNYRSSKNIVEAANS
IIDKNKVKLDKIVWTANDDGPPIKVHRSMTDGEEGRFVASTIFENKMQKQLMNNSFAILY
RTNAQSRAMEDALRKRDIPYRIYGGLSFYQRKEIKDVLCYLRLVLNPKDEEALVRVINYP
ARAIGNTTIEKLTIAANHYKRSMFEVMQNIEKIDLKLNAGTKNKITDFVTMIRSFQVLNE
THDAFFMADHVTKKTGLVQELKKDATPEGIARIENIEELLNGMKDFIEGQKEIDGARGSL
AEFMEDVALATDLDNDPGDDDRVALMTIHLAKGLEFPYVFIVGMEEDLFPSAMSMSTRSE
LEEERRLFYVALTRAEHQAYLTYAQSRYRWGKLSDSEPSRFIDEIDGQYLEYLTPEESNY
RYRPMIDIDIFGDVDKSKLRQAKPISSAPPKYITDNQPKPESPIRRLKPLSSPKSPSAAE
MDLSVGNIVMHERFGKGEVVSLEGAGADKKAEIRFDVGGIKKLLLRFAKLDIIG
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccatatcagccagttaaacgaagcccagcaacaacctgtattacataaagac
ggcccgatgatcatcatcgcaggagccggttctggaaaaacccgcgtacttactatacgg
attgcctacctgatgagcctgggtgtcgatgccttcaacatccttgcactcacctttacc
aataaggctgcgcgcgaaatgaagaaaaggatttccgatatcgtcggttcgactgaagcg
aaaaacctttggatgggaacctttcactccgttttcgcaaggatattacgcgccgaagct
gacaaactaggctatccttcgaactttacgatttatgatacgcaggattccgtaaggttg
atttccgcaatcattaaggaaatgcagttggacaaagatatttataagccaaagcaggtt
ttcggccgcatttcatcttacaaaaacagcctgattacggtaaaagcctatttcaatgac
cccgaattgcaggaagccgacgctatgtctaagaagccgcgcatcggggaaatttaccag
aattatgtagaccggtgttttaaagcgggcgcgatggattttgacgatttactgctcaaa
acaaacgaactcctgaaccgtttcccggatgtattgctgaaataccaaaaccgttttaaa
tacatcctggtcgatgagtaccaggatacgaatcactcgcaatacctgattgtacgggcg
ttgtccgaccgtttccagaatatttgtgtcgtgggcgacgacgcgcagagtatttatgcg
tttcgtggcgcgaacatcaataacatcctgaatttccaaaaggattatgaaggcgtaaaa
acataccgactcgaacaaaattaccgttcgtcaaaaaatatcgttgaagcggccaactcg
attatcgataagaataaggtcaaacttgacaaaatcgtatggaccgcaaatgatgacggt
ccgccgataaaagtacaccgcagcatgaccgacggcgaagaaggccgtttcgtggcaagc
accatcttcgaaaacaagatgcagaagcaattgatgaacaacagttttgcgattctttac
cgcaccaatgcccaatcgcgtgctatggaagatgcactgcgcaaacgcgatattccttac
aggatttacggtgggttatcgttttatcaacgaaaagagattaaggatgtcttgtgctac
ctgcgtttggtattgaatccgaaagacgaggaagccctggtacgcgtgatcaattatccc
gcgcgcgccatcggcaatacgacaatcgaaaagctgaccatcgctgccaaccattacaag
cggtctatgtttgaggtgatgcagaatattgagaagatcgacctgaaactgaatgccggc
acaaaaaacaagatcaccgatttcgtaacgatgatccggagttttcaggttttaaatgaa
acgcatgatgctttttttatggccgatcacgtgaccaagaaaaccggccttgtgcaggaa
ctgaaaaaggatgcaacaccggaaggcattgcgcgtattgaaaacatcgaggaattgctc
aacggtatgaaggatttcatcgaagggcaaaaggaaatcgatggcgcacgcggttcatta
gccgagtttatggaagatgtcgccctggccacagacctcgacaacgatcccggtgatgac
gaccgcgtagcgctgatgaccattcaccttgcgaaaggcctcgaatttccgtacgtgttt
atagtcgggatggaagaagatttattcccaagcgcgatgagcatgagcacccgcagcgaa
cttgaagaggagcgccgcctgttttacgtagccttaacccgcgctgaacatcaggcttat
cttacttatgcgcaatcacgttaccgctggggtaaactcagcgacagcgaaccatcgcgt
tttatcgacgagattgacggccagtatctcgaataccttactcccgaagaaagtaactat
cgctaccgcccgatgattgacattgatattttcggcgatgttgataaatcaaaactgagg
caggccaaaccaatatcatctgcaccgccaaaatacatcaccgataaccaacctaaacct
gaaagcccgatacgccgcctcaaaccgctcagcagcccgaaatctccgagcgctgctgaa
atggatttgtcagtagggaatattgtgatgcacgaacgcttcgggaaaggggaggttgta
agtcttgagggtgcaggcgcagacaaaaaagcggaaatccgttttgatgtaggtgggatc
aagaaactgttgctgcgttttgcgaaattggacatcataggttaa
DBGET
integrated database retrieval system
