Flavobacterium pallidum: HYN49_11110
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Entry
HYN49_11110 CDS
T06077
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
fpal
Flavobacterium pallidum
Brite
KEGG Orthology (KO) [BR:
fpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpal03032
]
HYN49_11110
03400 DNA repair and recombination proteins [BR:
fpal03400
]
HYN49_11110
Enzymes [BR:
fpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HYN49_11110
DNA replication proteins [BR:
fpal03032
]
Prokaryotic type
DNA Topoisomerases
HYN49_11110
DNA repair and recombination proteins [BR:
fpal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYN49_11110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF4890
Motif
Other DBs
NCBI-ProteinID:
AWI26407
UniProt:
A0A2S1SJ75
LinkDB
All DBs
Position
2692398..2694977
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AA seq
859 aa
AA seq
DB search
MSDGERLIPINIEDEMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLFGMYELGVLSNR
AHKKSARIVGEVLGKYHPHGDTSVYDAMVRMAQEWSLRYLLVDGQGNFGSVDGDSPAAMR
YTEARMKKISEEIMADIDKETVDFQLNFDDTLYEPKVMPTKVPNLLVNGASGIAVGMATN
MPPHNLTEVIDGTLAYIDNNDIEIDELMHHIKAPDFPTGGVIYGYEGVREAFKTGRGRIV
MRAKVNFEEVEGRESIIVTEIPYQVNKAEMIKKTADLVNDKKIEGIANIRDESDRTGMRI
VYILKRDAVPNVVLNTLYKYTQLQSSFSVNNIALVNGRPQMLNLKDLIHYFVEHRHDVVV
RRTQYDLRKAEERAHILEGLIIASDNIDEVIAIIRGSANTDQARERLMERFSLSDIQSKA
IVEMRLRQLTGLEQDKLRAEYEEIMKLIEHLKALLASKELRMELIKEELTEIRDKYGDER
RSQIEYSGGDVSIEDLIADENVVITISHAGYIKRTPLSEYKTQNRGGVGQKSAGTRDQDF
LEHMYVATNHQYMLFFTGKGKCFWMRVYEIPEGSKTSKGRAIQNLINIENDDKVKAFICT
QDLKDQEYINNHYLIMVTKQGQVKKTALEQYSRPRVNGVAAITIREDDELLEAKLTNGES
QVLVAVKSGKLVRFEESKTRPMGRTASGVRGITLQDDKDEVIGMVTVNDMNSEILVVAEN
GYGKRSSLEEYRVTNRGGKGVKTLNITEKTGKLVSINSVTDADDLMIINKSGLTIRMAVE
DLRVVGRATQGVRLINIKGNDSIAAVTKVMKEDEEEALEGAVEEAAAEGRPLETTDSTSE
ISDEDHEDPIADTEIDIEE
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacggagaaaggttaattccgattaacattgaagacgaaatgaagtcagcttac
atcgattattcgatgtcagttatcgtatcaagagcattgcctgatgtcagggatggtctg
aagcccgttcacagaagggttcttttcggaatgtatgaattaggagtattatcaaacagg
gcccataaaaaatctgcgagaatcgtcggggaagtgctcggtaagtatcacccgcacggc
gatacttcagtttatgacgcgatggtgcgtatggcccaggaatggagccttcgctacctg
ctcgttgacggtcagggtaacttcgggtctgttgatggtgacagccctgcggcaatgcgt
tatactgaggccaggatgaaaaaaatctcggaggagattatggctgatatcgataaggaa
accgttgatttccaactaaactttgacgatacgctttatgagccgaaagtaatgccgacc
aaagtgccgaaccttttggtaaatggcgcttccggaattgccgtcggtatggctacgaat
atgccgccgcacaaccttacggaagtgattgacggtacattagcgtatattgacaataat
gatatcgagattgatgaattaatgcatcatatcaaagcacctgatttccctacgggtggt
gtgatttacggttacgaaggtgttcgtgaagcgttcaagaccggccgtggaagaattgtg
atgcgcgccaaagtgaactttgaagaagtggaaggccgcgaatcgattatcgtaacagaa
attccatatcaggttaacaaagccgaaatgatcaagaaaacggcggatctggtgaatgat
aaaaaaatagaaggcattgccaatatccgtgacgaatcggacaggacaggtatgcgtatc
gtatatatcctgaaacgcgatgcggttccgaatgtcgttttgaataccttatataagtat
acgcaattgcagtcttctttcagtgtaaacaatattgctctggtgaatggaaggccgcaa
atgctgaacctgaaagacctgattcattatttcgttgagcaccgtcatgatgttgtcgta
cgccgtacgcaatatgatttacgcaaagcggaagagcgggcgcacattttagaaggattg
attattgcttcggataatattgatgaagtgatcgcaatcatccgtggttctgccaatacc
gatcaggcaagggaacgattgatggaacgcttcagcctttcggacattcagtccaaggcg
attgttgaaatgcgtctgcgtcagctgacaggattagagcaggacaaactgcgtgctgaa
tacgaagaaatcatgaagttgattgagcatttgaaggcattattggccagtaaagagctg
cgtatggaactaatcaaggaagaacttactgaaatccgtgataaatatggtgatgagcgc
cgttcgcagatcgaatattccggtggtgatgtcagtattgaagatttaattgccgatgaa
aatgtggtaataacgatttcacatgctggctatatcaaaaggacgccgttgtcagaatac
aaaacgcagaaccgcggcggcgtagggcagaagagtgccgggacacgcgaccaggatttt
ctggagcatatgtatgtggccacaaaccaccagtacatgctgttctttaccggaaaaggg
aaatgtttctggatgcgtgtttatgaaattcctgaaggaagtaagaccagcaaaggccgt
gccatccagaaccttatcaatatcgagaatgacgataaggtgaaagccttcatctgtact
caggacctgaaggaccaggaatacatcaacaaccattaccttattatggtgaccaaacaa
ggccaggtgaaaaaaactgctttggaacaatattcccgtccaagggttaacggggtggcg
gctattaccatccgtgaagatgacgaattgctggaagcaaaactgaccaatggggaaagc
caggttttggtggccgtaaaatcaggaaaactggtgcgtttcgaagaaagcaagacgcgt
ccgatgggaaggactgcttccggtgtacgcggcatcacacttcaggatgataaggacgaa
gtgattggtatggttactgtaaacgatatgaacagcgaaatccttgtggttgccgaaaac
ggttatggtaagcgttctagccttgaagaataccgcgtcacaaaccgtggtggtaaaggt
gtgaaaacattgaacatcactgaaaagaccggaaaactcgtttccatcaatagtgtgacc
gatgccgatgatttgatgatcatcaacaaatccggattgaccatcaggatggcagtcgaa
gatttaagggtcgtgggccgtgctacgcaaggtgtacgactcatcaacatcaaaggaaac
gattccattgctgccgttacgaaagtaatgaaagaggacgaagaagaagcgctggaaggt
gcggtggaagaagctgcagcagaaggaagacctttggaaaccacagattctacttctgaa
ataagtgatgaagaccatgaagatccgattgcggatactgaaattgatattgaggaataa
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