Flavobacterium pallidum: HYN49_14035
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Entry
HYN49_14035 CDS
T06077
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fpal
Flavobacterium pallidum
Brite
KEGG Orthology (KO) [BR:
fpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpal03032
]
HYN49_14035
03400 DNA repair and recombination proteins [BR:
fpal03400
]
HYN49_14035
Enzymes [BR:
fpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HYN49_14035
DNA replication proteins [BR:
fpal03032
]
Prokaryotic type
DNA Topoisomerases
HYN49_14035
DNA repair and recombination proteins [BR:
fpal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYN49_14035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF4982
Motif
Other DBs
NCBI-ProteinID:
AWI26931
UniProt:
A0A2S1SKM7
LinkDB
All DBs
Position
3306534..3307604
Genome browser
AA seq
356 aa
AA seq
DB search
MNRLQSKLEKIGRDPKITAKAVGLRYAANFNKGYHRIKTDDGFYYLDEARKKVRNKAVLE
RFKKLVIPPAWENVWISPYENGHLQVTGIDAKGRKQYRYHANWNKIRNQSKFHRLQNFAA
ALPLIREQVEADLNRKGLPYEKVVALVVKLIELTNIRIGNDAYKKLYGSFGLTTLQDKHV
KFDKSNIYFQFVGKKGVKHKIGLKSVKLLNLVKKCRDIPGQDLFQYYDDDGNHHVIGSAD
INGYLKNITQQDFTAKDFRLWAGSVNALCAFQSIGEPKNDTDCKRKIVEVMDSVAQKLGN
TRSVCRKYYVHPTVIAAYEKGSIWKYKPITKPSSLNEEERILINLLENETIAEVIA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggctgcaatccaaactcgagaaaatcgggcgtgatccaaaaatcaccgccaag
gctgtagggcttcgatacgcagcaaatttcaacaaaggctatcacaggatcaaaactgat
gatggcttttattatttggatgaagcacggaagaaagtcaggaataaggctgtgctcgaa
cgttttaagaaactcgtgattccgcctgcgtgggaaaacgtctggatttcgccttatgaa
aacggccatctgcaagttacgggaatagatgccaaaggcaggaaacaatatcgttatcat
gccaattggaacaagatcaggaaccagtcgaaatttcaccgcctgcaaaattttgccgcc
gcattgcctttgatacgcgagcaggttgaagccgatctgaacagaaagggactgccttat
gaaaaagttgtggctctggtggtaaagctcattgagcttacgaacatcaggattgggaat
gatgcgtataagaaactgtacggatcattcggattgacaacgcttcaggacaaacacgta
aaatttgacaaatcgaacatctatttccagtttgtcggaaagaaaggcgtgaagcataaa
atcgggcttaagagcgtgaaattattaaaccttgttaaaaaatgccgcgacattccggga
caggatttgttccagtattatgatgatgacgggaatcatcatgtcataggctcagcggac
atcaacggttacctgaaaaatattacgcaacaggattttacggcaaaggattttcggctt
tgggccggaagcgtgaatgctttgtgtgcgtttcaatccatcggtgaaccaaaaaacgat
actgactgcaagcgtaagattgttgaagtgatggattcggtggcgcagaaacttgggaat
acgcgatccgtatgccgcaaatattatgtccacccgacagtgattgcagcttatgaaaaa
ggttctatctggaaatacaaacccatcaccaagccatcttcattgaatgaagaagaacgg
atattgatcaatttactagaaaacgaaaccattgccgaagtaatcgcataa
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