Flavobacterium panici: NLJ00_01925
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Entry
NLJ00_01925 CDS
T08520
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
fpb
Flavobacterium panici
Pathway
fpb00521
Streptomycin biosynthesis
fpb00523
Polyketide sugar unit biosynthesis
fpb00541
Biosynthesis of various nucleotide sugars
fpb01100
Metabolic pathways
fpb01110
Biosynthesis of secondary metabolites
fpb01250
Biosynthesis of nucleotide sugars
Module
fpb_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NLJ00_01925 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NLJ00_01925 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NLJ00_01925 (rfbC)
Enzymes [BR:
fpb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NLJ00_01925 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UUF14874
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All DBs
Position
complement(422774..423322)
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AA seq
182 aa
AA seq
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MKIEKTFIEGLLIVEPIILGDERGYFFESYSKTKFQDLGVEIDFIQDNQSFSRYGTLRGL
HYQNPPFAQTKLVRVLQGEIVDIVVDLRKGSLTYGKTFSVLLSAENKKQLLIPKGFAHGF
SVISETASVMYKCDQIYNKASEGGIKFDDPSLNIDWVIDLNKAIISEKDQTLPFIQECNS
LF
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgaaaaaacatttattgaaggtttactgatcgtagaacctattatattagga
gatgaaagaggttatttttttgaatcatacagcaaaactaaatttcaagacttaggtgtt
gaaattgattttattcaggataatcaatctttttcacgatatggaaccttgagaggttta
cattatcaaaatccaccgtttgctcaaacaaaactagttcgtgttttacaaggcgaaata
gtagatattgtagttgatttgagaaaaggttcgctaacttacggcaaaacattcagtgtt
ttattatcagccgaaaataaaaagcagctattaataccaaaaggttttgcacatggtttt
tcagtgataagtgaaaccgcttctgtaatgtataaatgtgatcagatttacaataaagct
tctgaaggaggtattaaatttgatgatccgtcattaaatattgactgggtgatagattta
aataaagccattatttcagagaaagatcaaactctacctttcattcaggaatgcaatagt
ttattttaa
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