Flavobacterium panici: NLJ00_02105
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Entry
NLJ00_02105 CDS
T08520
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fpb
Flavobacterium panici
Pathway
fpb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NLJ00_02105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpb03021
]
NLJ00_02105
03400 DNA repair and recombination proteins [BR:
fpb03400
]
NLJ00_02105
Enzymes [BR:
fpb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NLJ00_02105
Transcription machinery [BR:
fpb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NLJ00_02105
DNA repair and recombination proteins [BR:
fpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NLJ00_02105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
UUF14909
LinkDB
All DBs
Position
complement(461798..462790)
Genome browser
AA seq
330 aa
AA seq
DB search
MAIFNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSALEGYAITSVRIE
GVDHEFSTISGVVEDVTEIILNLKQVRFKRQIEDIDNESVTISVSGKDQLTAGDFQKFIS
GFQVLNPDLVICNLDSKIKLNFDLTIEKGRGYVPAEENKKQNAAIGTIFTDSIFTPVKNV
KYAIENFRVEQKTDYEKLVFEIKTDGSINPKDALTEAAKVLIHHFMLFSDERITLEADEI
AQTESYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELDELVAVKNLTFGMDLAKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatatttaattttcaaaagcccgataaagttatcatgatcgattcaaccgatttt
gaaggtaaattcgaatttagacctttagaacctggttatggattgacagttggtaatgca
cttagaagagttttgctttcagcgttagaaggttatgcaattacatctgttcgtatcgaa
ggtgtagatcatgagttttctactatttcaggtgttgttgaagatgttaccgaaattatc
cttaatctaaagcaagtacgtttcaaacgtcagatagaagatatcgataatgaatcagtt
actatttctgtttctggtaaagatcaattaacagcaggtgattttcaaaaatttatctca
ggttttcaagttttgaatccagaccttgttatctgtaatttagattctaaaatcaaattg
aacttcgatttaacaatcgaaaaaggtagaggatacgttcctgctgaggagaacaaaaaa
caaaatgctgcaattggaacgatttttacagattctatttttactccggtaaaaaatgta
aaatatgcaatcgaaaatttccgtgtagagcaaaaaacagattacgaaaaattagttttt
gaaattaaaactgatggatctattaatccaaaagatgctcttactgaagctgctaaagtt
ttaattcaccatttcatgttgttttctgatgaaagaattacacttgaggctgacgaaatt
gcacaaacagaatcgtatgatgaagagtcattgcatatgagacaattgcttaaaactaag
cttgttgatatggatttatctgtaagagcattaaattgcttgaaagcggctgaagttgat
acacttggtgatttagtatcgttcaataaaaatgacctaatgaaattccgtaattttggt
aaaaaatctttaactgaacttgatgaacttgttgcagtgaagaatttaactttcggaatg
gatttagctaaatacaaattagataaagaataa
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