Flavobacterium panici: NLJ00_03900
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Entry
NLJ00_03900 CDS
T08520
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
fpb
Flavobacterium panici
Pathway
fpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NLJ00_03900 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpb03400
]
NLJ00_03900 (recO)
DNA repair and recombination proteins [BR:
fpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NLJ00_03900 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NLJ00_03900 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7220
Motif
Other DBs
NCBI-ProteinID:
UUF15252
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All DBs
Position
complement(833290..834003)
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AA seq
237 aa
AA seq
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MLVKTKAIVISSLKFQEKSLIVKCFTLSSGLKSYFVRDAFSNRKANQKIAYFQPLSILEI
EAVHKNKGTLENFKEIKNGIPFQTIHTDIVKSTMVMFLSEILHYSIQEEEKNESLFLFLE
TALTWLDNHDEISNFHLILLLEITKYLGFYPDTSEIDLPHFEMNDGVFTLFNKGNVLSEH
ETNLLKKLIDLKFDNTEKIFHVVERQILLKVLIDYYSSHLEGFKKPKSLEVLKEIFS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgtcaaaaccaaagcaatagtaatctcctctttaaaatttcaggaaaaaagcttg
attgtaaaatgttttacactttcaagcggactgaaatcttattttgtgcgcgatgctttt
tccaatagaaaagcaaatcaaaaaattgcttatttccagccattgtccattttagaaatc
gaagccgtacataaaaacaaaggaacgcttgaaaacttcaaagagataaaaaacggaatc
ccttttcaaaccattcatacggatattgtaaaaagtacgatggtcatgtttctgtctgaa
atacttcattattctattcaggaagaagaaaaaaatgaatccctttttttgtttttagaa
accgccttgacatggctcgataatcatgatgaaatttctaattttcatttgattttactt
ttagaaatcacaaaatacttaggtttttaccccgatacttcagaaatagatctgccacat
tttgaaatgaatgatggtgtttttacacttttcaataaaggtaatgtactttctgaacac
gaaacaaatctgctcaaaaagctaatcgatttaaagtttgataataccgaaaaaatcttt
cacgtagtcgaaagacaaattttattgaaggtattaattgattactacagctctcattta
gaaggattcaagaagccaaaatcactagaagttttgaaagaaatattttcttaa
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