Flavobacterium panici: NLJ00_04545
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Entry
NLJ00_04545 CDS
T08520
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
fpb
Flavobacterium panici
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpb03400
]
NLJ00_04545 (radA)
DNA repair and recombination proteins [BR:
fpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NLJ00_04545 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
DnaB_C
Zn_ribbon_LapB
AAA
Lon_C
DUF7125
AAA_22
AAA_24
AAA_5
TniB
CobU
AAA_14
Rad51
ABC_tran
AAA_16
NTPase_1
Isochorismatase
nSTAND_NTPase5
RsgA_GTPase
DZR
AAA_18
NACHT
Motif
Other DBs
NCBI-ProteinID:
UUF15381
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Position
1007664..1009025
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AA seq
453 aa
AA seq
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MSKVKTSFFCQNCGTQYSKWQGQCNACKEWNTIAEEIIQKQEKAAWKSEPTSTSKAPKPL
KINEIDSAQEIRMDTTDGELNRVLGGGIVPGSLTLLGGEPGIGKSTLLLQISLKLPYKTL
YVSGEESQKQIKMRAERITPSSENCYILTETKTQNIFKQIEAIQPEIVIIDSIQTLHTDY
IESTAGSISQIRETTAELIKFAKETNIPVILIGHITKDGNIAGPKILEHMVDTVLQFEGD
RNHIYRILRSLKNRFGSTSELGIYEMLGSGLREVSNPSEILISHKDEELSGTAIATTLEG
MRPLMIEIQSLVSTAVYGTPQRSTTGYNAKRLNMILAVLEKRAGFRLGAKDVFLNVTGGI
SVDDPAIDLAVVAAILSSNEDIPVGKGFCFAGEVGLSGEIRPVNRVDQRIQEAEKLGFDT
IFVSKYNKIALKNTGIKIELVAKIEDVASILFG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagttaaaacttcctttttttgtcaaaattgcgggacccagtattctaaatgg
cagggacagtgcaacgcgtgcaaagaatggaatacaattgccgaagaaattattcagaag
caggaaaaagcagcgtggaaaagtgaaccaacctcaacaagcaaagcaccgaaaccttta
aaaataaatgaaattgattcggctcaggaaatccgtatggatactaccgatggcgaattg
aatcgtgttttgggaggcggcattgttccgggatctttaacccttttgggcggagaacca
ggaattggaaaaagtacacttttacttcaaatctcattaaaattaccttataaaacttta
tatgtttctggagaagaaagtcagaagcagataaaaatgcgtgccgaaagaattacgcca
agcagtgaaaactgctacattctaacggaaaccaaaacgcagaatatcttcaaacaaatt
gaagccattcagcctgaaatcgtaattatcgattctattcagactttacatacggattat
attgaatcgactgccggaagtatttctcaaatcagggaaaccactgccgaattaatcaag
tttgccaaagaaaccaatattccggttattttgattggacatattaccaaagacggaaat
atcgccgggccaaaaattctggaacatatggttgatactgttttgcagtttgaaggcgac
agaaatcacatttaccgaattttacgctccctaaaaaaccgtttcggttcaacttctgaa
ctcggaatttacgaaatgcttggaagcggtttgcgagaagtaagcaatccttcagaaata
ttgatctcgcacaaagacgaagaattgtcaggaaccgcaattgctacaacacttgaaggc
atgcgtccgttaatgatcgaaattcaatctttagtaagtacagcagtttacggaactcct
caaagaagcacaacaggttacaatgcgaaaagactaaacatgattttggctgttcttgaa
aaaagagccggatttcgtttaggcgcaaaagacgttttcctaaacgtaaccggaggaatt
tctgttgatgatcctgcaattgaccttgccgttgttgctgccattttatcatcaaatgaa
gatattccggttggaaaaggtttttgttttgccggcgaagttggactttctggagaaatt
cgtcctgtaaatcgtgtagatcagcgtattcaggaagctgaaaaattaggtttcgacact
atttttgtttctaaatacaacaaaattgctttaaaaaatactggaatcaagattgaactt
gtggcaaaaattgaagatgtcgcgagtattctttttggttga
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