Flavobacterium panici: NLJ00_04595
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Entry
NLJ00_04595 CDS
T08520
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
fpb
Flavobacterium panici
Pathway
fpb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NLJ00_04595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpb03400
]
NLJ00_04595
Enzymes [BR:
fpb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NLJ00_04595
DNA repair and recombination proteins [BR:
fpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NLJ00_04595
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
UUF15391
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All DBs
Position
complement(1021082..1021843)
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AA seq
253 aa
AA seq
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MKIISYNVNGIRAAITKGFIEWLQAASPDVICLQEIKATQDQIPVEAITAAGYPYQYYYP
ATKKGYSGVAILSKIEPKKVVYGTGIHHMDFEGRNLRADFDDVSVMSLYLPSGTNIERLD
HKFMFMDDFQTYVNELKLTLPNLIICGDYNICHEAIDIHDPVRNKTVSGFLPAERAWLDS
FMKSGFIDSFRHFNKDPHHYSWWSYRAGARGNNKGWRIDYNLVSEVMGHRLKRAVILPDA
IHSDHCPVLVEIE
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatttcttataatgtaaacggaattcgtgctgcaattactaaaggttttatt
gaatggcttcaggcggcaagtccagatgttatctgccttcaggagataaaagctactcag
gatcagattcctgtcgaagcaataacggctgccggctatccgtatcaatattactatcct
gcaacaaaaaaaggatatagtggtgttgcaatattatctaaaatagaacctaaaaaagtg
gtttacggaaccggaattcatcatatggattttgaaggcagaaacttacgcgctgatttt
gatgatgtttcggtaatgagtttgtatctaccttctggaactaacatcgaaagattagat
cataaatttatgtttatggatgattttcaaacctatgttaacgaattgaaactgacgctt
ccaaaccttattatttgcggcgattacaatatttgccacgaagcaattgatattcacgat
ccggttcgtaacaaaacggtttcgggatttttacctgcagaacgtgcctggctggatagt
tttatgaagtctggttttattgatagtttccgtcattttaataaagatccgcatcattat
tcatggtggagttaccgcgcaggagcaagaggaaacaataaaggctggcgtatcgattat
aatttagtgagcgaagtaatggggcatcgtttaaaacgtgccgttattcttccagatgct
attcactcagatcattgcccagttttagttgaaattgaataa
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