Flavobacterium panici: NLJ00_05290
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Entry
NLJ00_05290 CDS
T08520
Name
(GenBank) PorP/SprF family type IX secretion system membrane protein
Organism
fpb
Flavobacterium panici
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PorP_SprF
Motif
Other DBs
NCBI-ProteinID:
UUF15528
LinkDB
All DBs
Position
complement(1182348..1186958)
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AA seq
1536 aa
AA seq
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MKKILLFITLFYGFSNVLYSQDKVENGVVSFSLPIRNSLKFNRYLINPAFSFVRESNAYA
SFYNKRQWVQFDNAPQTYLANYSGRFRENEAFAIGLFQQNYGLMTVFGGVVNFAHNIVLQ
EDSNLTFGLNVGAYQSGLDKGKIISDDPDILNGDYPSNTMLTVNPGINYGTAFLDFGLSV
NNLILYNFGSGVVKEDPERAIELHAMYTGYIDSYGFFEQSKFSGIVKTEIKKDKTVLSGL
AMLSLKQGVWAQAGYNTLYGVSAGLGVNISPSIAIEYNYERGMGNFTNMGGSHEFAIAYK
FKNRNYYYGDDEEGSLIDPSRTTSKPVIAKPKTNAAPVTRVDGAEKARLAAEAKAKADAE
AKQARLAAAEKVKADADAAAKAKLDADNKAKADAEALKIKLAADAKAKADAAAAARAQTA
TANRAVAAEQKTTAQLAADKARADAEARRIKLAADNKARVDAAAAARAQAQASKPSATAA
QKTAAQLAADKSKADAEALKIKLAADAKAKADAEAKAKQTAAATPTTPAPAPQKTQAQLT
AEKAKADAEALKIKLAADAKAKADAAEAKRKADAKAKAEEADLQSILAADAKAKADSDAL
QARLAAEAKAKAAAEAKTKASIDAANRAKAAADAKAKAAEGAALKEKLAADAKAKADAEA
RQAIIAAEAKAKADAEALKIKLAADAKAKADAEAQAKLDAEAKAKADAEALQAKLAADAK
AKADAEAQAKLDAEAKAKADAEALQAKLVADAKAKADAEALKAKLAADAKAKADAEALQA
KQAADAKAKADEEARQAKLAADAKAKADAEALQAKLAADAKAKADAEAEKTRLAAEAKAK
ADMEALQAKLIADARVKADAEATAKAKAEAEEKQLREAEEARQAKLAADAKAKADTEALQ
AKLAADAKAKADAEALQAKLAADAKAKADAEALQAKLAADAKAKADAEALQAKLAADAKA
KADAEALQAKLAADAKAKADAEVLQAKLAADAKAKADAEALQAKLAANAKAKADAEALQA
KLAADAKAKADAEALQAKLAADAKAKADAEALQAKLAADAKAKADAEALQAKLAADAKAK
ADAEALQAKLAADAKAKADAEALQAKLAADAKAKADAEALQAKLAADAKAKADAEALQAK
LAADAKAKADAEALKAKLAADAKAKADAEALQAKLAADAKAKADAEALQAKLAADAKAKA
DAEASEKQKADEETRKLKEEEERQARLAAEKAKADAEAAAARAAAAAKDETAKAIESLTQ
SIESSGKTQNDLLDQFKSTVANKQKDLNDLKEENDLSEKGIYKEPKPFKSVAAENSQIEA
LKSQLADASKAQKDEIAKLTNLYNERLKKVPNKNDALNKAYLEKINELKAAQLKMELEGA
ALLADLERIKAETEIEKKRRIKRAAYENDQGRYAQDVAALKRIKETTKVSSTPLTAADFD
FGEDQSNMQIIKNIKNSESGYYMILAVHSSVEKRDEFLTKAVASGLSNINFFYNITTSKY
YIYYEKFDGLQEATKALEAKGKSPYNGKMAIVKVEN
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaattttactattcataactttattttacggtttttctaatgtactctattct
caggacaaagttgagaatggagttgtttcgttttcattacctatcagaaattcattaaag
tttaatagatatttaataaaccctgcatttagctttgttcgcgaatcaaatgcttatgca
agcttttacaacaaaagacaatgggtgcagtttgacaatgcaccgcaaacttatttagct
aattattctggccgattcagagaaaatgaagcctttgctattggtttgtttcaacaaaat
tatggtttaatgaccgtgtttggcggagttgttaatttcgctcacaatatcgttttgcag
gaagacagtaatcttacttttggtttaaacgtaggcgcttaccaaagcggtttagacaaa
ggaaaaattatatctgatgatccggatattttaaatggtgactacccttcaaacacaatg
cttactgtaaatccggggattaattatggaaccgcttttcttgatttcggattatcggta
aacaacttaattctttacaattttggttctggcgttgtaaaagaagatccggaaagagca
attgaattacacgcaatgtacaccggatacattgacagttatggtttttttgagcaaagt
aaattctcaggaatcgtaaaaacagaaattaaaaaagataaaacagttctttcaggactt
gccatgctttcgctgaaacaaggagtttgggcacaagcaggttataatacattatacgga
gtttctgcaggtttaggggttaacatttcacctagcattgcaatcgaatataactacgaa
agaggaatgggcaattttacaaatatgggaggttctcatgaatttgctattgcttataaa
ttcaaaaacagaaattactattacggagatgatgaagaaggatcattaatagacccttcg
agaacgacatctaaaccagtaattgctaaaccaaaaacaaatgcagctcctgtaacaaga
gtagatggagctgagaaagcaagattagctgctgaagcaaaagcaaaagctgatgccgaa
gcaaaacaagcaagacttgctgctgcagaaaaagttaaggctgatgccgatgctgcagca
aaagcaaaattagacgcagacaataaagctaaagcagatgctgaagctcttaagataaaa
ttagccgccgatgctaaagctaaagcagatgccgcagctgccgcaagagcacagacagca
acagcaaacagagccgttgctgcagaacaaaaaacaactgcacaattagctgcagataaa
gcaagagcagatgctgaggcaagaagaataaaattagctgcagataataaagctagagta
gatgctgctgctgccgcgagagcacaagcacaagcaagcaaaccatctgcaacagctgca
caaaaaacagccgcacaattagctgcagataaatcgaaagcagatgctgaagcattaaaa
attaagcttgcagccgatgctaaagctaaggcagacgcagaagcaaaagcgaaacaaaca
gctgctgcaacgccgacgacgccagctccggctccgcaaaaaacacaagcacaattaact
gctgagaaagcaaaagcggatgcagaagcacttaaaataaaactagctgcagatgctaaa
gctaaagcagatgctgcagaagcaaaacgtaaagcagatgctaaagcaaaagctgaagaa
gcagatttacaatcaatcctggctgcagatgctaaagcaaaagcagattctgatgcactt
caggcaagattagctgcagaagctaaagcaaaagccgctgctgaagcaaaaacaaaagct
tctattgatgctgcaaacagagcaaaagcagccgctgacgcaaaagcaaaagcagcagaa
ggagctgctctaaaagaaaaattagcagctgatgcaaaagcaaaagcggatgcagaagcc
agacaagcaattatagctgcagaagcaaaagcaaaagcggatgcagaagcattaaaaata
aaattagcagccgatgcaaaagcaaaagctgacgcagaagctcaggctaaattagatgcg
gaagcaaaagcgaaagctgatgcagaagcacttcaggcaaaattagcagcggatgcaaaa
gcaaaagccgacgctgaggctcaggcaaaacttgatgcagaagcaaaagctaaagcagat
gcagaagcattacaagcaaaattagtagctgatgcaaaagctaaagccgacgctgaagca
ttaaaagctaaactagctgcagacgcaaaagctaaggcagatgcagaagcattacaagca
aaacaagcggcagatgctaaagcgaaagcagatgaagaagcacgtcaggctaaattagca
gcagacgcaaaagctaaggctgacgcagaagcattacaagctaagttagcagcagatgca
aaagcaaaagcggatgcagaagcagaaaaaacaagattagctgcagaagcgaaagcaaaa
gcagatatggaagctttacaagctaaattaattgccgatgcaagagttaaggccgatgcg
gaagcaactgcaaaagcaaaagcggaagcagaagaaaaacaattaagagaagctgaagaa
gcacgtcaggctaaattggctgcagacgcaaaagcaaaagctgatacagaagcattacag
gcgaaactagcagcagatgcaaaagctaaggcagatgcagaagcactacaagctaaattg
gctgcagatgcaaaagcaaaagctgacgcagaagcattacaagcgaaattagcagcagac
gcaaaagcgaaagctgatgcagaagcattacaagctaaacttgcagcggatgcaaaagca
aaagccgatgcagaagcattacaagctaaattggcagcagatgcaaaagcgaaagccgat
gcagaagtacttcaagctaagttagcagcagatgcaaaagcaaaagccgatgcagaagcg
ttacaagctaaattagcagccaacgcaaaagctaaggcagatgcagaagcattacaagct
aagttagcagccgacgcaaaagctaaggcagatgcagaagcattacaagctaaactggca
gccgacgcaaaagctaaggcagacgcagaagcattacaagctaagttagcagcagatgca
aaagcaaaagccgatgcagaagcactacaagctaaactggcagccgacgcaaaagctaag
gcagacgcagaagcattacaagcgaaattggcagcagatgcaaaagctaaggcggacgca
gaagcattacaagctaagttagcagcagatgcaaaagcaaaagccgatgcagaagcatta
caagcgaaactagcagccgacgcaaaagctaaggccgacgcagaagcattacaagctaag
ttagcagccgacgcaaaggcaaaagcagatgcagaagctcttaaagcaaaattagctgct
gatgcaaaagcgaaagcagacgcagaagcattacaagctaagttggcagcggatgcaaaa
gctaaggcagatgcagaagcattacaagctaaacttgctgcagatgcaaaagcaaaagcg
gatgctgaagcttcagaaaaacaaaaagctgacgaagaaacaagaaaattaaaagaagaa
gaagaacgtcaggcaagattagcagcggagaaagcaaaagctgatgcagaagcagcagca
gccagagcagcagcggcagcaaaagatgaaacagcaaaagcgattgaaagcttaactcag
tcaattgaaagttcaggtaaaacacaaaatgatttattagatcagtttaaatcaacagta
gctaataaacaaaaagacttgaatgatttaaaagaagagaatgatttaagtgaaaaaggt
atttacaaagaaccaaaacctttcaaaagtgtagctgcagaaaacagtcagatagaagct
ttaaaatcacaacttgcagatgctagtaaagcacagaaagatgagattgctaagctgaca
aatttatataacgaaagacttaaaaaagttcctaataaaaatgatgctttaaacaaagct
tatcttgagaagataaacgaattgaaagcagcacagttaaaaatggaacttgaaggtgcg
gcattacttgccgatttagagcgtattaaagctgaaactgaaattgagaaaaaacgtaga
attaagcgtgcggcatacgaaaatgatcagggaagatatgctcaggatgtagctgctctt
aaacgtattaaagaaacaacgaaagtaagcagtacaccgctcacggcagctgattttgat
tttggtgaagatcagtcaaacatgcagattattaagaatattaaaaattctgaaagtggt
tattatatgattcttgcagtacacagcagtgttgaaaaacgagatgagttcttaactaaa
gctgtagcatcagggctttcaaatattaatttcttttacaatataacaacaagtaaatat
tatatctattacgagaaattcgatggtctgcaagaagcaactaaggcattagaagctaaa
ggtaaatcaccatacaacgggaaaatggctatcgtaaaagtcgaaaattaa
DBGET
integrated database retrieval system
