Flavobacterium panici: NLJ00_06005
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Entry
NLJ00_06005 CDS
T08520
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
fpb
Flavobacterium panici
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fpb02000
]
NLJ00_06005
Transporters [BR:
fpb02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NLJ00_06005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_6
TPR_2
TPR_8
Motif
Other DBs
NCBI-ProteinID:
UUF15669
LinkDB
All DBs
Position
1335400..1336959
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AA seq
519 aa
AA seq
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MKYKIFNYIAVFFSLAVVTTSCVDDEDLTQLDPNNDAVDSFWKTDQDALEGINAVYGSLL
TDGTYMRSTPLLLDAKADDSRTNSPWPSMYNVGHFNSNVADAAIYGWAFETYYQGIYRAN
QVLTNVPDIQFENEALKNRILGQAYFLRGLYLFHAVNMFKNVPIPLDVEVYHPQKSNEEG
WAQVIADFKTAAELLPNSYVGVTGPDAGQKGRATKGAALGYLGKAYLFTKDFTNARTTFK
QVIDLGVYSLVSNYRDNFTTANENNSESLFEVQFSRDAGGVDLGWGGAPASGWGKTSARA
ITYAPRAFGWTDVQPTWALFNEFQEEKTKTGDVDPRLDATIFYNKPGTKLYGRDFAAFYA
SSPGDLNDLFCRKYQNSDGEFADEYDWRSGINERLLRYADILLMYAETLNETGDTPGAYT
YIQMVRNRVNLPDLSVTKPGMNQDQMREQIGHERFLEFPLEGHRFDDIRRWGWLQNPTKL
AWLKTRDAEFNSYTAGREYFPIPQLEMDNNPGTKQNDSY
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaaatataaaatatttaactatatagcggttttcttttcactggctgttgtaacaaca
agctgtgttgacgatgaagatttgacccaactcgacccaaataatgatgcagtagattct
ttttggaaaacagatcaggatgcacttgaaggaattaatgccgtatacggaagtttattg
acagatggaacgtacatgagaagtacgccattattattagatgcaaaagccgatgattct
cgcacaaacagcccttggccatctatgtacaacgttggacattttaactccaatgtagcc
gacgcagccatttacggatgggcttttgaaacttattatcaggggatttatcgtgccaat
caggttttaaccaatgttcctgatattcaatttgaaaatgaagcactcaaaaacagaatt
ttaggccaagcctattttttaagaggattgtatttgtttcatgcagtaaatatgtttaaa
aatgtaccaattcctttagacgttgaggtatatcatccgcagaaatcaaatgaagaaggc
tgggctcaggttattgccgattttaaaacagccgccgaattactgcctaattcttatgtt
ggcgttacaggtccggatgcaggtcaaaaaggacgcgcaacaaaaggagcagctttagga
tatttaggaaaagcctatttgttcactaaagattttacaaatgccagaacgacttttaaa
caagtgattgatttaggagtttattctttagtttcaaactatcgggacaattttacaaca
gcaaacgaaaacaattcagaatccctgtttgaagtacaatttagcagagatgccggcggt
gttgatttaggctggggcggtgcacctgcatctggctgggggaaaacatctgcacgtgcc
attacgtatgcaccaagagcttttggatggacagatgtacagccaacatgggccttattt
aatgaatttcaagaagaaaaaacaaaaactggagacgttgatccgcgtttagatgccaca
atattttacaataaacccggaacaaaattatacggaagagattttgcggctttttatgcc
tcaagcccaggagatttaaacgatttgttctgtagaaaatatcaaaattctgatggagaa
tttgcagacgaatacgactggcgttctggaattaacgaaagattgttaagatacgccgat
attcttttaatgtatgctgaaactttaaacgaaacaggcgatactccgggagcatataca
tacattcaaatggttagaaaccgagtaaatctgcccgatttatcagttacaaaaccggga
atgaaccaagaccagatgagagaacaaatcgggcacgaaagatttttagaatttccattg
gaaggccaccgttttgatgacatacgccgctggggttggcttcaaaatccaacaaaatta
gcatggctgaaaacaagagacgccgagtttaattcgtatacagcaggacgtgaatatttc
ccaattccgcagttagaaatggataataatccgggaacaaaacagaatgacagttattga
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