Flavobacterium panici: NLJ00_06945
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Entry
NLJ00_06945 CDS
T08520
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
fpb
Flavobacterium panici
Pathway
fpb00300
Lysine biosynthesis
fpb00470
D-Amino acid metabolism
fpb00550
Peptidoglycan biosynthesis
fpb01100
Metabolic pathways
fpb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NLJ00_06945
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NLJ00_06945
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NLJ00_06945
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NLJ00_06945
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fpb01011
]
NLJ00_06945
Enzymes [BR:
fpb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
NLJ00_06945
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
NLJ00_06945
Peptidoglycan biosynthesis and degradation proteins [BR:
fpb01011
]
Precursor biosynthesis
Amino acid ligase
NLJ00_06945
Racemase
NLJ00_06945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
UUF15850
LinkDB
All DBs
Position
1561692..1564160
Genome browser
AA seq
822 aa
AA seq
DB search
MSINLKSLIPVFNAEWIGSDSDIFVDHISIDSRSLQNGSKTLFIALSGVNNDAHLYISEL
IEKGVQNFVVQYIPENVKGKANFFVVKNTLKALQELAGYYRDLFDFPIIGLTGSNGKTIV
KEWLNFLLSPDYNIIRSPKSYNSQVGVPLSVIAINGKHNLGIFEAGISTVNEMVNLEKII
KPNIGVLTSIGSAHDEGFENLTQKIKEKLLLFKKSAVIIYQKNELVDQCLLDFSVEYPLQ
NRTLFSWSFTDATADVFILMKETKNDSTIIKYQYKDDVYNLEIPFSDSASIENTISCLLV
LLRFNYDFEVIQNRVKLLYPVEMRLEVKNGIHNCSLIDDSYSSDFQSLKIALDFLESQKK
NASKAVILSDIFQSGFTNEELYSKVAQLISDNKINRVIGIGTTISSFADKFPNSTMFQNT
AEFIAEIENLNFNNETILIKGARSFQFEEIVSLLEEKTHETVLEINLDAINHNLNYFKSK
LADDVKIMVMVKAFGYGNGGLEIAKLLEHNKVNYLGVAFADEGISLKNGGIKLPIMVLNP
ESTSFPSIIQYKLEPEIYSIKGLNAFLKIAREKNLKDFPIHIKVDTGMHRLGFEDNTIDE
LIETLKGNSTVRVQSILSHLATSDDLKHYDFVIQQINLFERLSSKLMTELNINPIRHILN
TSGISNFPDAQYNMVRLGIGLYGVSNDPLEQKYLENVGTLKSIISQVRVIPAGDSVGYGR
RFMAEKETKIATIPIGYADGISRLWGNQVGFVTIKNQKAYIVGSVCMDMLMVDVSHIDCK
EGDSVIIFGESPTVIEMAEALKTIPYEIMTSISQRVKRVFFR
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgagcataaatttaaaaagcctaatcccagtttttaacgccgaatggataggttcagat
tctgatatttttgtagatcatatttcgatcgacagccgttctttacaaaacgggtctaaa
acattgtttattgctctttccggggttaataacgatgctcatttgtacatttccgaattg
atagaaaaaggcgttcaaaattttgtcgttcagtatattcccgaaaatgtaaaaggaaaa
gccaattttttcgtcgtaaaaaataccctcaaagcccttcaggaattggcgggttattat
cgtgatttattcgatttccctataattggtttaaccggaagtaacggaaaaaccatcgtg
aaagaatggttgaatttccttttaagtcccgactataatattatccgaagcccaaaaagt
tataactcgcaagttggcgttccgctttcagttattgccataaatggaaaacataattta
ggaattttcgaagccggaatttcgacagttaacgagatggttaacctcgaaaaaatcatc
aaaccaaatattggtgttttaaccagtataggttctgcacacgatgaaggtttcgaaaat
ctgacacaaaaaatcaaagaaaaattattgcttttcaaaaaatcagccgtaatcatttat
caaaaaaatgaattggtagatcagtgtcttttagatttttctgtcgaatatccacttcaa
aacagaactttattttcatggagttttacagacgctactgccgatgtttttattctgatg
aaagaaactaaaaacgattcgacaatcattaaataccaatataaagacgatgtttacaat
ttagagattccgtttagtgattctgcttctattgaaaataccatttcatgtttattggtt
ttactgcgttttaattatgattttgaggttattcaaaatcgtgtaaaactgctttatccg
gttgaaatgcgtttggaagttaaaaacggaatccacaattgcagtttaattgatgatagt
tacagctcggattttcaatcgctgaaaattgcattggattttttagaaagccagaaaaaa
aatgcttcaaaagctgtcatattatcagatatttttcaaagcggatttacaaatgaagaa
ctttattctaaagttgcccagttaatttcagataataaaatcaatcgtgtaattggtatt
ggaactacgatttcatcttttgcagataaatttccaaatagcacgatgtttcaaaatacg
gcagaatttatcgccgaaattgaaaacttgaatttcaataatgaaaccattttaataaaa
ggggcaaggtcatttcagtttgaagaaattgtttcgctgctggaggaaaaaacgcatgaa
acagttctcgaaattaaccttgacgccatcaatcataatttaaattacttcaaatcaaaa
ctggccgacgatgtaaaaattatggttatggtaaaagcttttggttacggaaacggcgga
cttgaaattgcaaaattacttgaacataataaagtgaattatttaggtgtggctttcgcc
gatgaaggaatttcgctgaaaaatggcggaatcaaactaccaattatggttttgaatcct
gaatcgaccagttttccgtcgataattcaatacaaattagaacctgaaatttacagtata
aaaggattaaatgcctttttgaaaattgccagagaaaagaatttaaaagattttccaatt
cacatcaaagtcgacaccggaatgcatcgtctaggttttgaagacaatacgatcgatgag
ttaattgaaactttaaaaggaaattcaaccgttcgtgttcagagtattttatcacatttg
gcaacaagcgacgatttaaaacattatgattttgtcattcaacagattaatttattcgaa
agattatcttcaaaattaatgacggaattaaacataaacccaattcgtcatattttaaat
acatcgggaatcagtaattttccagatgcacaatataatatggttcgtttagggattggt
ttatacggtgtttcaaacgatccgttagagcagaaatatctggaaaatgtgggaacttta
aaatcgatcatctcacaagttcgtgttattcctgctggtgacagcgtaggttacgggcgt
cgttttatggccgaaaaagaaaccaaaattgccacaatcccaattggttatgcagatgga
atttcgagattatggggcaatcaggttggttttgtaaccattaaaaatcaaaaagcctat
atcgtaggaagtgtctgcatggatatgttaatggttgatgtaagtcatattgattgtaaa
gaaggcgattcggtaattattttcggcgaaagcccaaccgttatcgaaatggccgaagct
ttaaaaaccattccttatgaaataatgacaagtatttcgcagcgtgtgaaacgagtattt
tttagatag
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