Flavobacterium panici: NLJ00_08620
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Entry
NLJ00_08620 CDS
T08520
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
fpb
Flavobacterium panici
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpb03021
]
NLJ00_08620 (nusA)
03009 Ribosome biogenesis [BR:
fpb03009
]
NLJ00_08620 (nusA)
Transcription machinery [BR:
fpb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NLJ00_08620 (nusA)
Ribosome biogenesis [BR:
fpb03009
]
Prokaryotic type
rRNA transcription factors
NLJ00_08620 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_NusA_C
KH_2
S1_2
KH_1
Motif
Other DBs
NCBI-ProteinID:
UUF16170
LinkDB
All DBs
Position
1952172..1953425
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AA seq
417 aa
AA seq
DB search
MENLALIDSFSEFKDNKLIDRVTLMAILEDVFRNALKKKYGSDDNFDIIINPDKGDMEIW
RRRVIVADEDLDFENEEITLTEARMIEADFEIGEEVSEEVKLIDLGRRAILALRQNLISK
IHEHDNTNLYKQFKDIIGDIYTAEVHHVRPRVVILVDDEGNEIVLPKEKQIPSDFFRKGD
NVRGIIESVELKGNKPQIIMSRTSEKFLEKLFEQEIPEVFDGLITVKNVVRIPGEKAKVA
VDSYDDRIDPVGACVGMKGSRIHGIVRELGNENIDVINYTNNIQLFITRALSPAKVSSIK
IDEENKRAEVFLKLEEVSKAIGRGGHNIKLAGQLTGYELDVIREGDVAGATADEDDVELT
EFSDEIEDWVIEEFAKIGLDTAKSILKQEVEDLVRRTDLEEETILDVMKILKEEFDN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttagcattaatcgattcattctcagagtttaaagataataaacttattgat
cgtgtaacgcttatggcaattttagaggacgtgtttagaaatgcattgaagaaaaaatac
ggttctgatgataatttcgatatcattataaatcctgacaaaggagatatggagatatgg
agaagaagagttatcgttgctgacgaagatcttgattttgaaaatgaagaaattactttg
actgaagcaagaatgatcgaagcggattttgaaattggtgaagaggtttctgaagaggta
aaattgattgatttaggaagaagagctattttggctttacgccaaaacttaatatctaaa
attcacgaacatgataatacaaatctttacaagcaatttaaagatattattggtgatatt
tatactgccgaagtacaccacgtacgtccaagagttgttattttagttgatgacgaagga
aacgaaattgtgcttccaaaggaaaaacaaattccatctgactttttccgtaaaggagat
aatgttcgtggaattattgaaagcgtggaattaaaaggaaataaaccacaaattattatg
tctagaacttctgagaagtttttagaaaaattatttgaacaagaaattcctgaagtattc
gacggtttaattacagttaaaaatgtagtgcgtattccgggagaaaaagcaaaagttgct
gtagactcttatgacgacagaattgatcctgttggagcatgtgttggtatgaaaggatcg
cgtattcacggaattgttcgtgaattaggaaacgaaaatatcgacgtaatcaactataca
aacaatattcaattgtttattacaagagcattaagccctgcaaaagtttcttcaatcaaa
attgacgaagaaaacaaaagagctgaagtattcttgaaattagaagaagtttctaaagca
attggtagaggaggtcacaatattaaattagcgggtcagctaacaggttacgaattagat
gttattcgtgaaggagatgttgcaggtgcaacggctgatgaagacgatgttgaattaaca
gagttctcagatgaaatcgaagactgggtaattgaagaatttgctaaaataggtttagat
actgcaaaaagtatcttaaaacaagaagtagaagatttagtaagaagaacggatttagaa
gaggaaacaattcttgacgttatgaaaatactaaaagaagagtttgataactaa
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