Flavobacterium panici: NLJ00_09535
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Entry
NLJ00_09535 CDS
T08520
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
fpb
Flavobacterium panici
Pathway
fpb00470
D-Amino acid metabolism
fpb00550
Peptidoglycan biosynthesis
fpb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NLJ00_09535 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NLJ00_09535 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fpb01011
]
NLJ00_09535 (murD)
Enzymes [BR:
fpb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NLJ00_09535 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
fpb01011
]
Precursor biosynthesis
Amino acid ligase
NLJ00_09535 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD_N
MurD-like_N
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
UUF16347
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All DBs
Position
2170279..2171610
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AA seq
443 aa
AA seq
DB search
MRLVVLGGGESGVGTAILGKKQGYDVFVSDFGKIKESYKEVLIINKIAWEEEQHTEDLIL
NADVVMKSPGIPDKSPIVKKLIEKGVKVISEIEFAVPYTEAMTIGITGSNGKTTTTMLTY
HLLKSAGLNVGLGGNIGKSFAWQVAENKFDAYVLELSSFQLDGIIEYRPDIAIITNISPD
HLDRYEYKYQNYINSKFRITMNQTESDYLIYDADDEASAEWLKNNKTKAKLIPFSLTKSF
DEGASINNNKMEIKINQEEFTMETEYIALEGKHNMKNAMAASSVAKLMQIRNATIRESLS
NFQGVEHRLEKVLKIQNVQYINDSKATNVNATFFALDSMNVPTVWIVGGVDKGNDYNELM
PLVREKVKAIICLGVDNHKIISAFGDVVDIMVEVNNMNDAVKTAQKLTEKGDAVLLSPAC
ASFDLFENYEDRGKQFKQAVHNL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagattagtggtattaggaggaggagaaagtggggttggaaccgccattctcggaaag
aaacaaggttacgatgtttttgtatcggattttggaaagataaaagaaagctataaagaa
gttcttatcattaataaaattgcctgggaagaagaacagcatacagaagatttgattcta
aatgctgatgtggtgatgaaaagccccggaattccagataaatctccgatagttaaaaag
ttgattgaaaaaggagtaaaagtaatttcggaaatcgaatttgccgtcccttatacagaa
gcaatgacaattggaattaccggaagtaatggtaaaacaacaacaacaatgctcacgtat
catttgcttaaatcggccggactaaatgtaggtttgggaggaaatataggaaagagtttc
gcctggcaggtagccgaaaataaattcgacgcatacgttcttgaattaagcagttttcag
ttagacggaataatagaatataggccggatatagcgataataacaaacatcagcccggac
catttagatcgatacgaatataaatatcaaaattatatcaattcgaagttccgaataaca
atgaaccaaaccgaaagcgattatctcatttacgatgcagacgacgaggcaagcgcagaa
tggttaaaaaataacaaaacaaaagcaaaattaattcctttttcattgacaaaaagtttt
gacgaaggagcttctataaataacaacaaaatggaaataaagatcaaccaagaagagttt
acaatggaaacagaatacattgcgttagaaggaaaacataatatgaaaaacgcaatggca
gcaagctctgtagcaaaattgatgcaaattagaaatgcaacaattcgtgaaagtttatct
aattttcaaggtgttgaacaccgtttagagaaagtgttaaaaatccagaatgtacaatac
atcaacgattcaaaagcgacaaacgtaaacgctactttctttgctttagacagcatgaat
gttccaaccgtttggattgtaggaggagttgataaaggaaacgattacaacgaattaatg
ccattggttcgtgaaaaagtaaaagccattatctgtcttggagttgataaccataaaatt
attagcgcttttggcgatgttgttgatattatggttgaagtgaacaatatgaacgacgct
gtaaaaacagcccaaaaattaaccgaaaaaggtgatgcagttttattgtctccagcctgc
gcaagttttgatttattcgaaaactacgaagacagaggaaaacaattcaagcaagcggta
cataatttataa
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