Flavobacterium panici: NLJ00_10710
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Entry
NLJ00_10710 CDS
T08520
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fpb
Flavobacterium panici
Pathway
fpb03030
DNA replication
fpb03430
Mismatch repair
fpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NLJ00_10710
03430 Mismatch repair
NLJ00_10710
03440 Homologous recombination
NLJ00_10710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpb03032
]
NLJ00_10710
03400 DNA repair and recombination proteins [BR:
fpb03400
]
NLJ00_10710
Enzymes [BR:
fpb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NLJ00_10710
DNA replication proteins [BR:
fpb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NLJ00_10710
DNA repair and recombination proteins [BR:
fpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NLJ00_10710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
GIY_YIG_2
DNA_pol_A_exo1
DUF7508
Motif
Other DBs
NCBI-ProteinID:
UUF16570
LinkDB
All DBs
Position
complement(2437607..2438986)
Genome browser
AA seq
459 aa
AA seq
DB search
MKNTEYAIVDIETTGGNASGSRITEIAIIIHDGKNVLDRYETLVNPEQDIPPSIFGLTGI
NNEMVANAPIFDDISEKVLEMLTDRVFVAHNVNFDYSFVHHQLEKAGFKWSAKKLCTVRA
ARKIKPGLGSYSLGNLCNSLNIGLENRHRAGGDADATAILFQLLLEWDDAGEIDKMIKKT
AQDQRLPPNLPPDDFNNLPEKPGVYYFYNQQKKVIYVGKAINVKKRVASHFSGNNINPQR
QHFLRDIHGISFEICGTELMALLLECTEIKKLWPTYNRALKRFEAKFGIYQYEARNGYKY
LAIGKVSKFQICIHEFNSQYDGINLLRSLAEQFEIDHRFCKYTRPEEGELFQNNEVKDLP
DVVLHNEQVDNAIDFLLTNRPTFAIIDKGRSKDERSCIWIENGHFHGMGYIPSDVSIHDP
LEVKNYTEPYKSNQYIEHLIFAYAEKYPGKVFFNKQFLK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatacggaatatgccatagtcgatattgaaaccacaggcggaaatgccagtggc
agccgcattacagaaattgccattattattcatgatggcaaaaatgtacttgatcgttat
gaaacactcgttaatccggaacaggacattcctccttctatttttggattaaccggtatt
aataacgaaatggtggccaatgcgcctattttcgatgatatttcagagaaagtattagaa
atgcttactgatcgtgtttttgttgctcataatgtcaacttcgattattcatttgttcat
catcaacttgaaaaagcaggttttaaatggtctgcaaaaaaactttgtaccgttcgtgca
gcccgaaaaatcaaaccgggtttaggctcttacagtttaggaaatctatgcaattcctta
aacataggtttagaaaacaggcaccgtgcgggcggagatgcagatgcaacagctatttta
tttcagcttttactggaatgggacgatgcaggagaaatcgacaaaatgatcaaaaaaacg
gcccaggatcagcgtttaccgccaaatcttccgccagatgatttcaataatttacccgaa
aaacccggcgtatattatttttataatcagcagaaaaaagtgatttatgtagggaaagct
atcaacgtaaaaaaacgtgtcgcttctcatttcagcggtaataatattaacccgcaaagg
cagcactttttaagggatattcacggaatttcctttgaaatctgcggtactgaattaatg
gcgcttttattagaatgcaccgaaatcaaaaaactctggccaacttacaacagggcctta
aaacgctttgaagcaaaatttggaatttatcagtatgaagcccgaaatggttataaatat
ctggccattggaaaagtaagcaaatttcagatctgtattcatgaatttaacagccaatat
gatggaattaatttactgcgaagtctggcagaacagtttgaaatcgatcatagattctgc
aaatatacaagacctgaagaaggagaactttttcaaaataatgaagtaaaagatctgcct
gatgttgtacttcataacgagcaagttgataatgctattgattttttattgaccaacaga
cccacttttgcgattattgacaaaggaagatctaaagacgaaagaagttgcatttggatt
gaaaacggacattttcatggcatgggatatattccgtcagatgtctctattcatgatccg
ttagaagtaaaaaactatacggagccttataaaagcaatcaatatattgaacatttgatt
tttgcttacgcagaaaaatatccgggtaaagtgttctttaacaagcagttcctgaaataa
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